Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05913 and BPUM_0170

See DNA alignment / Visit BSNT_05913 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence pep-align/BSNT_05913___yxlG.1.24716.seq
#    -bsequence pep-align/BPUM_0170.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05913___yxlG-BPUM_0170.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05913___yxlG-BPUM_0170.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05913___yxlG
# 2: BPUM_0170
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:      77/263 (29.3%)
# Similarity:   132/263 (50.2%)
# Gaps:          14/263 ( 5.3%)
# Score: 306.5
# 
#
#=======================================

BSNT_05913___      1 MKVMMALLQKEWLEGWKSGKLIWLPIAMMIVGLTQPLTIYYMPEIIAHGG     50
                         |.:|:||:.|.:.|.|::::||...|:.:|||:|:..:|::::...
BPUM_0170          1 ----MMMLKKEFRELFTSYKMLFVPIIFTILMITQPITLKMLPDLLSKSA     46

BSNT_05913___     51 NLPDGMKISFTMPSGSEVMVSTLSQFNTLGMALVIFSVMGSVANERNQGV    100
                     |||:|.......||..|.:.|.||:|::||:.::|..|||::|.||..||
BPUM_0170         47 NLPEGSTFYIPEPSAGEALASALSKFDSLGVFILIMIVMGTIAGERASGV     96

BSNT_05913___    101 TALIMSRPVTAAHYIVSKWLIQSVIGIMSFAAGYGLAYYYVRLLFEDASF    150
                     ||:||.:|::...|.|||....:.:.:.|.......:.|||.:.|....:
BPUM_0170         97 TAMIMVKPISRMSYYVSKICAYACLTLFSLIVAVLASVYYVDIQFGHVDW    146

BSNT_05913___    151 SRFAASLGLYALWVIFIVTAGLAGSTIFRSVGAAAACGIGLTAAVSFVVS    200
                     ........||...::.||.:.:..|..|:....|....:.:...:..|.|
BPUM_0170        147 GDVLKGTLLYYPNLLLIVVSTICSSAFFKRSVTAGGVSLLINLILFTVPS    196

BSNT_05913___    201 LFPDG-AKWLPAEICKQAEHILLHGERADFFGWSLTFSILYIMLLAVFSV    249
                     .:.|. .|:.|..:...||.::..|..:|    .|..|:|.:::|..|..
BPUM_0170        197 FYEDTLGKFAPKGVTSAAEEMIHRGTYSD----QLLTSVLGVLVLIGFFF    242

BSNT_05913___    250 ---W-RFRRYESY    258
                        | .|||.|. 
BPUM_0170        243 LIGWFFFRRQEL-    254


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