Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00344 and BPUM_0162

See DNA alignment / Visit BSNT_00344 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence pep-align/BSNT_00344___ybbP.1.24716.seq
#    -bsequence pep-align/BPUM_0162___ybbP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00344___ybbP-BPUM_0162___ybbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00344___ybbP-BPUM_0162___ybbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00344___ybbP
# 2: BPUM_0162___ybbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     250/273 (91.6%)
# Similarity:   261/273 (95.6%)
# Gaps:           0/273 ( 0.0%)
# Score: 1273.0
# 
#
#=======================================

BSNT_00344___      1 MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLV     50
                     ||..|||||||||||||||:||||||||:|||||||||||||||||||||
BPUM_0162___y      1 MALGDIPFLQYLGNAVDILVVWYVIYKLMMVIRGTKAVQLLKGIVVIVLV     50

BSNT_00344___     51 RMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSR    100
                     ||.|.||||:||||||||||||||||||||||||||||||||||||||||
BPUM_0162___y     51 RMGSAYLGLNTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSR    100

BSNT_00344___    101 SGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERDTGMGDYIETGIPL    150
                     |||||||.||||||||||||||||||||||||||||||||.|||||||||
BPUM_0162___y    101 SGTPVEEQQQKTIEAITKAINYMAKRRIGALLTIERDTGMNDYIETGIPL    150

BSNT_00344___    151 NAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKEL    200
                     |||||||||||||||||||||||||||.:|||||||||||||||||||||
BPUM_0162___y    151 NAKVSSELLINIFIPNTPLHDGAVIMKRDEIAAAACYLPLSESPFISKEL    200

BSNT_00344___    201 GTXHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLE    250
                     || |||||||||||||||:||||||||:|||:|||||||||||||:|||.
BPUM_0162___y    201 GTRHRAAVGISEVTDSLTVIVSEETGGISVARNGDLHRELTEEALQEMLI    250

BSNT_00344___    251 AEFKKNTRDTSSNRWYWRGKKNG    273
                     |||.||::|.||.:|||||||||
BPUM_0162___y    251 AEFSKNSKDASSTKWYWRGKKNG    273


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