Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00344 and BPUM_0162
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence dna-align/BSNT_00344___ybbP.1.24716.seq
# -bsequence dna-align/BPUM_0162___ybbP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00344___ybbP-BPUM_0162___ybbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00344___ybbP-BPUM_0162___ybbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00344___ybbP
# 2: BPUM_0162___ybbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 823
# Identity: 660/823 (80.2%)
# Similarity: 660/823 (80.2%)
# Gaps: 2/823 ( 0.2%)
# Score: 2638.0
#
#
#=======================================
BSNT_00344___ 1 ATGGCTTTTGAGGATATCCCTTTTTTGCAGTACCTCGGCAATGCCGTTGA 50
||||||||.|.||||||.||||||||||||||||||||.|||||.|||||
BPUM_0162___y 1 ATGGCTTTAGGGGATATTCCTTTTTTGCAGTACCTCGGTAATGCTGTTGA 50
BSNT_00344___ 51 TATTCTCCTTGTTTGGTATGTGATATATAAATTGATTATGGTGATACGCG 100
|||||||.|||||||||||||||||||||||||.||.|||||.||.||||
BPUM_0162___y 51 TATTCTCGTTGTTTGGTATGTGATATATAAATTAATGATGGTCATCCGCG 100
BSNT_00344___ 101 GCACGAAAGCGGTTCAGCTGTTAAAAGGAATTGTAGTCATCGTGCTTGTT 150
|.||.||||||||||||||.|||||.||||||||.|||||.||.||.||.
BPUM_0162___y 101 GAACAAAAGCGGTTCAGCTTTTAAAGGGAATTGTGGTCATTGTTCTCGTC 150
BSNT_00344___ 151 CGTATGGCCAGCCAATATTTGGGCCTCAGCACACTTCAATGGCTGATGGA 200
.|.||||..||....|||.|.||.||.|.|||||||||||||||||||||
BPUM_0162___y 151 AGGATGGGAAGTGCGTATCTCGGTCTTAACACACTTCAATGGCTGATGGA 200
BSNT_00344___ 201 CCAAGCGATAACATGGGGATTTTTAGCAATTATTATTATTTTTCAGCCTG 250
.||||||||.||.||||||||..|.||.||.|||||||||||||||||.|
BPUM_0162___y 201 TCAAGCGATTACGTGGGGATTCCTTGCGATCATTATTATTTTTCAGCCAG 250
BSNT_00344___ 251 AGCTGAGAAGAGCGCTTGAACAGCTAGGCCGCGGCCGCTTTTTTTCGAGG 300
||||.||.|||||||||||.|||||.||.||||||||.||.||.||.||.
BPUM_0162___y 251 AGCTAAGGAGAGCGCTTGAGCAGCTTGGGCGCGGCCGTTTCTTCTCAAGA 300
BSNT_00344___ 301 AGCGGCACCCCTGTTGAAGAAGCGCAGCAGAAAACGATTGAGGCCATTAC 350
|||||.||.|||||.||.|||..|||||||||||||||.|||||.|||||
BPUM_0162___y 301 AGCGGGACACCTGTAGAGGAACAGCAGCAGAAAACGATCGAGGCAATTAC 350
BSNT_00344___ 351 AAAAGCGATCAATTATATGGCGAAACGCCGTATAGGCGCCCTGCTGACCA 400
||||||.||.||.||||||||.|||||..|.||.|||||.||||||||.|
BPUM_0162___y 351 AAAAGCAATTAACTATATGGCAAAACGTAGAATCGGCGCGCTGCTGACAA 400
BSNT_00344___ 401 TTGAGCGGGATACTGGAATGGGGGATTATATTGAGACCGGCATACCACTA 450
|.|||||.||||||||.|||...|||||.||.|||||.||.||.||..||
BPUM_0162___y 401 TAGAGCGTGATACTGGGATGAATGATTACATAGAGACTGGAATTCCTTTA 450
BSNT_00344___ 451 AATGCCAAAGTCAGCTCTGAGCTGCTGATCAATATTTTTATTCCAAACAC 500
|||||.||.||.||.||.||||||||.||.||||||||.||||||||.||
BPUM_0162___y 451 AATGCAAAGGTGAGTTCAGAGCTGCTCATTAATATTTTCATTCCAAATAC 500
BSNT_00344___ 501 CCCGCTTCATGATGGTGCGGTAATTATGAAAAATAATGAAATTGCCGCGG 550
||||||||||||||||||.||.||||||||...|.||||.|||||.||.|
BPUM_0162___y 501 CCCGCTTCATGATGGTGCTGTCATTATGAAGCGTGATGAGATTGCAGCTG 550
BSNT_00344___ 551 CCGCCTGTTATCTGCCGCTTTCTGAGAGCCCGTTTATTTCTAAAGAACTG 600
|.||.||||||.|.|||||.||.||.||.||.|||||.||.||.|||||.
BPUM_0162___y 551 CGGCTTGTTATTTACCGCTGTCAGAAAGTCCTTTTATCTCAAAGGAACTT 600
BSNT_00344___ 601 GGCACGCGNCACAGAGCGGCAGTCGGTATCAGTGAAGTAACAGACAGTTT 650
||.||||| |||||.|||||||||||.||.||.|||||.||||||||.||
BPUM_0162___y 601 GGGACGCGTCACAGGGCGGCAGTCGGAATTAGCGAAGTGACAGACAGCTT 650
BSNT_00344___ 651 GACGATTATTGTGTCTGAAGAGACCGGCGGCGTCAGTGTGGCAAAGAACG 700
|||..|.||.||.|||||.|||||.||||||.|...|||.||||..||.|
BPUM_0162___y 651 GACCGTCATCGTTTCTGAGGAGACAGGCGGCATTTCTGTCGCAAGAAATG 700
BSNT_00344___ 701 GCGACCTTCACAGAGAGCTTACAGAAGAAGCGCTGAAAGAAATGCTTGA- 749
|.||.||.|||.||||..|.||||||||||||||..||||||||| |||
BPUM_0162___y 701 GTGATCTCCACCGAGAATTGACAGAAGAAGCGCTTCAAGAAATGC-TGAT 749
BSNT_00344___ 750 AGCCGAGTTTAAGAAAAACACCAGAGACACTTCTTCTAACCGCTGGTATT 799
.||.||.||||..||.||||.||.|||..||||.||.|.|...|||||||
BPUM_0162___y 750 TGCTGAATTTAGTAAGAACAGCAAAGATGCTTCCTCGACCAAATGGTATT 799
BSNT_00344___ 800 GGAGGGGCAAGAAAAATGGATAA 822
|||||||||||||||||||||||
BPUM_0162___y 800 GGAGGGGCAAGAAAAATGGATAA 822
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