Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00343 and BPUM_0161
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence pep-align/BSNT_00343___ybbM.1.24716.seq
# -bsequence pep-align/BPUM_0161___ybbM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00343___ybbM-BPUM_0161___ybbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00343___ybbM-BPUM_0161___ybbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00343___ybbM
# 2: BPUM_0161___ybbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 141/208 (67.8%)
# Similarity: 172/208 (82.7%)
# Gaps: 0/208 ( 0.0%)
# Score: 775.0
#
#
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BSNT_00343___ 1 MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIAL 50
|||.|:||.|||.:|||||.|:||..|..||::||:|..||.::||||||
BPUM_0161___y 1 MSCQEKIVLLMHQYLDGDIEPQDEKELKSHLQSCEECCTHFQQIEKSIAL 50
BSNT_00343___ 51 VRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILM 100
|:||||:|||.||||.|||.|||||||.|::||.:.||::.|||:|:|||
BPUM_0161___y 51 VQSTSHIEAPTDFTAKVMAGLPKEKKRVSIQRWIKAHPLMVAAALFLILM 100
BSNT_00343___ 101 GGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLII 150
||..|.||:.||||||||||||||.|.|||||:||||||||||||||||:
BPUM_0161___y 101 GGSLFTSWNTDHNFSVSKQPNLVVVNDTVTVPKGETVKGDVTVKNGKLIV 150
BSNT_00343___ 151 KGKIDGDVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLD 200
:||:||:|||||||:..||||||||||.|||::|||.||||||..::|:.
BPUM_0161___y 151 EGKVDGNVTVVNGEQLTASAGQVTGQINEINEVFDWIWYKMKSTAQNVMR 200
BSNT_00343___ 201 AFNPNGEE 208
...|..::
BPUM_0161___y 201 VIGPEEQK 208
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