Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06183 and BPUM_0159

See DNA alignment / Visit BSNT_06183 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_06183___rocF.1.24716.seq
#    -bsequence pep-align/BPUM_0159___rocF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06183___rocF-BPUM_0159___rocF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06183___rocF-BPUM_0159___rocF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06183___rocF
# 2: BPUM_0159___rocF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     206/303 (68.0%)
# Similarity:   247/303 (81.5%)
# Gaps:           7/303 ( 2.3%)
# Score: 1079.0
# 
#
#=======================================

BSNT_06183___      1 --MDKTISVIGMPMDLGQARRGVDMGPSAIRYAHLIERLSDMGYTVEDLG     48
                       ..|.::::|:||||||.||||||||||||.|.:.|:|..:.:.|||||
BPUM_0159___r      1 MGEQKKVTLVGVPMDLGQMRRGVDMGPSAIRCAGVKEKLESLSFGVEDLG     50

BSNT_06183___     49 DIPINR---EK-IKNDEELKNLNSVLAGNEKLAQKVNKVIEEKKFPLVLG     94
                     |||:.:   || :...|:||||......|:.||:||:.:::...|||:||
BPUM_0159___r     51 DIPVEQRDDEKGLYTSEKLKNLTENAGANQLLAEKVDSIVQSGSFPLILG    100

BSNT_06183___     95 GDHSIAIGTLAGTAKHYDNLGVIWYDAHGDLNTLETSPSGNIHGMPLAVS    144
                     ||||||||||||.:|||:|||||||||||||||.||||||||||||||||
BPUM_0159___r    101 GDHSIAIGTLAGVSKHYENLGVIWYDAHGDLNTEETSPSGNIHGMPLAVS    150

BSNT_06183___    145 LGIGHESLVNLEGYAPKIKPENVVIIGARSLDEGERKYIKESGMKVYTMH    194
                     ||:||..|.|:.||:||:||||||:|||||||||||..|:|.|:||||||
BPUM_0159___r    151 LGLGHADLTNIGGYSPKLKPENVVLIGARSLDEGERALIREKGIKVYTMH    200

BSNT_06183___    195 EIDRLGMTKVIEETLDYL-SACDGVHLSLDLDGLDPNDAPGVGTPVVGGI    243
                     ||||||||:|:||.:.|| ...||||||||||||||.:.|||||||.|||
BPUM_0159___r    201 EIDRLGMTRVMEEAISYLKERTDGVHLSLDLDGLDPAECPGVGTPVAGGI    250

BSNT_06183___    244 SYRESHLAMEMLYDAGIITSAEFVEVNPILDHKNKTGKTAVELVESLLGK    293
                     ||||||||||:|.:|||:||||||||||:||.||||.:.||.|:.||:|:
BPUM_0159___r    251 SYRESHLAMELLEEAGILTSAEFVEVNPVLDEKNKTAEAAVALIGSLMGE    300

BSNT_06183___    294 KLL    296
                     |||
BPUM_0159___r    301 KLL    303


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