Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00322 and BPUM_0157

See DNA alignment / Visit BSNT_00322 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:14
# Commandline: needle
#    -asequence pep-align/BSNT_00322___ybbH.1.24716.seq
#    -bsequence pep-align/BPUM_0157.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00322___ybbH-BPUM_0157.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00322___ybbH-BPUM_0157.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00322___ybbH
# 2: BPUM_0157
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     174/291 (59.8%)
# Similarity:   223/291 (76.6%)
# Gaps:           2/291 ( 0.7%)
# Score: 842.5
# 
#
#=======================================

BSNT_00322___      1 MATGGLAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSD     50
                     |:.|||.::.:||.|||.||:.:||||||||.|.|:|||:|||..|.:|.
BPUM_0157          1 MSAGGLTLLHTMKAKLPQSEKIIADYILAHPDKVIKSTVHEISQAAGASS     50

BSNT_00322___     51 AAVIRLCKSLGLKGFQDLKMRVAGDLAKPTFQGYRDIVPHEPLPSISEKT    100
                     :|||||||||||.|:.|||||:||||.....||||||...||:.||.:||
BPUM_0157         51 SAVIRLCKSLGLDGYHDLKMRIAGDLMHSDKQGYRDIEQDEPIQSIIQKT    100

BSNT_00322___    101 AGNAIQAIQDTSDLMDYKELERAVSLLLKAHTVHFIGLGASGIVAKDAQQ    150
                     |||:||:|:||:.:::...||:||.|||.|:.:||||:|||||||.||||
BPUM_0157        101 AGNSIQSIKDTASILNADALEKAVQLLLHANQIHFIGVGASGIVAADAQQ    150

BSNT_00322___    151 KWLRIHKQATAFTDTHLVASLIANADKDDIVFAISFSGETQEIIELFAMA    200
                     |:|||:..||||||.|:.:::||||.::||||.|||||||.:||:...:|
BPUM_0157        151 KFLRINYAATAFTDMHIASTVIANAGENDIVFGISFSGETLDIIQALQLA    200

BSNT_00322___    201 KEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSAATSSRLAQLFI    250
                     |:.|:.||:||....||||||.||.|.|:.||||..||||||||:|||::
BPUM_0157        201 KDNGVKTIALTHPGHTSVSALCDVHLSTSGSNEAPFRSAATSSRMAQLYL    250

BSNT_00322___    251 IDVLFLGMAAEQYETTTGYIDKTRAAIQYENKIRHLEGEGF    291
                     ||||||.:|:.|||.|..||||||.||:  :..|..:|:..
BPUM_0157        251 IDVLFLSLASRQYEETAQYIDKTRHAIR--SMKRKSKGDST    289


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.