Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00322 and BPUM_0157
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:14
# Commandline: needle
# -asequence dna-align/BSNT_00322___ybbH.1.24716.seq
# -bsequence dna-align/BPUM_0157.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00322___ybbH-BPUM_0157.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00322___ybbH-BPUM_0157.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00322___ybbH
# 2: BPUM_0157
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 949
# Identity: 592/949 (62.4%)
# Similarity: 592/949 (62.4%)
# Gaps: 152/949 (16.0%)
# Score: 1677.0
#
#
#=======================================
BSNT_00322___ 1 ATGGCCACAGGCGGTTTAGCGA-TCA------TCCAATCAATG-AAGCAT 42
|||.|..||||.| || ||| |.||..||||| |||||
BPUM_0157 1 ATGTCAGCAGGTG-------GACTCACCCTACTTCACACAATGAAAGCA- 42
BSNT_00322___ 43 AAGCTCCCTCCATCCGAGCGCAAA----CTTGCAGATTATATCCTAGCCC 88
||||||||.|.|||.|| ||| .|||||||.||||||||.||||
BPUM_0157 43 AAGCTCCCCCAATCTGA----AAAAATCATTGCAGACTATATCCTTGCCC 88
BSNT_00322___ 89 ATCCCCACAAAGCAATCGAAAGCACGGTCAACGA----AATCAGCGCCTT 134
||||..||||||..||..|||||||.||..|||| |.|||| ||
BPUM_0157 89 ATCCTGACAAAGTCATTAAAAGCACAGTACACGAGATTAGTCAG-GC--- 134
BSNT_00322___ 135 AGCCAATTCAAGTGACGCTGCCGTCATCAGGCTCTGCAAATCACTCGGTT 184
||||..|.||||...|.||||.|||||..|.||.||.|||||.|||||..
BPUM_0157 135 AGCCGGTGCAAGCAGCTCTGCAGTCATTCGCCTTTGTAAATCTCTCGGGC 184
BSNT_00322___ 185 TAAAAGGATTTCAAGATTTAAAAATGAGAGTAGCGGGCGATCTG--GCAA 232
||.|.||.|.|||.||||||||||||.||.|.||.||.||..|| |||.
BPUM_0157 185 TAGATGGCTATCACGATTTAAAAATGCGAATCGCTGGAGACTTGATGCAC 234
BSNT_00322___ 233 AGCCTACGTT--TCAGGGCTACCGGGATATTGTTCCCCACGAGCCGCTGC 280
|| ||.| .|||||||||||.|||||.|..|...|.||.||..|.|
BPUM_0157 235 AG----CGATAAACAGGGCTACCGTGATATCGAACAAGATGAACCAATTC 280
BSNT_00322___ 281 CCTCCAT--TTCCGAAAAAACGGCCGGCAATGCCATTCAAGCCATTCAGG 328
..||||| ||| |||||||.||.||.||..|.||||||.|.|||.|||
BPUM_0157 281 AATCCATTATTC--AAAAAACAGCAGGAAACTCGATTCAATCGATTAAGG 328
BSNT_00322___ 329 ATA---CTTCAGACCT--------GATGGACTACAAAGAGCTTGAACGAG 367
||| |||| .|.|| ||||.|.||.|||.||||
BPUM_0157 329 ATACTGCTTC-TATCTTAAATGCAGATGCATTAGAAAAAGCT-------- 369
BSNT_00322___ 368 CGGTT---TCTCTGCTTC--TCAAAGCTCATACCGTGCATTTTATCGGCC 412
||| |..||||||| .||||.|..| |.||||||||||||.
BPUM_0157 370 --GTTCAATTACTGCTTCATGCAAACCAAA-----TCCATTTTATCGGCG 412
BSNT_00322___ 413 TCGGGGCTTCCGGCATTGTCGCCAAGGACGCCCAGCAAAAGTGGCTTCGC 462
||||.||.||.|||||.|||||...|||.||||||||.||.|..|||.|.
BPUM_0157 413 TCGGTGCATCTGGCATCGTCGCAGCGGATGCCCAGCAGAAATTTCTTAGA 462
BSNT_00322___ 463 ATTCATAAACAAGCAACCGCGTTTACAGACA--CTCATCTTGTGGCAT-- 508
||..||.|...|||.||.||.|||||.|||| |.|||| ||||
BPUM_0157 463 ATCAATTATGCAGCGACTGCCTTTACTGACATGCACATC-----GCATCA 507
BSNT_00322___ 509 -CTTTAATCGCAAATGCAGATAAAG-ACGACATCGTATTCGCCATTTCGT 556
|..||||||||||||||| .|.|| |.||||||||.||||..||.||.|
BPUM_0157 508 ACGGTAATCGCAAATGCAG-GAGAGAATGACATCGTGTTCGGTATATCTT 556
BSNT_00322___ 557 TTTCAGGAGAGACACAGGAAATCATTGAACTGTTTGCC------ATGGCC 600
||||||||||.||....||.||||||.|| ||| .|.||.
BPUM_0157 557 TTTCAGGAGAAACGTTAGACATCATTCAA------GCCCTACAGCTCGCA 600
BSNT_00322___ 601 AAGGAAAAAGGCATCACAACGATCAGCCT-----CACACAATTCAGTCAG 645
||.||.||.||..|.|.|||.|| .|||| |||.|| .|.||.
BPUM_0157 601 AAAGACAATGGAGTGAAAACCAT-TGCCTTGACGCACCCA----GGCCAT 645
BSNT_00322___ 646 ACATCCGTCTCCGCACTGGCTGATGTCCCTTTGTATACAGCCCATTCCAA 695
|||..|||.||.||..|...||||||.|...|.|..||..||..||||||
BPUM_0157 646 ACAAGCGTTTCTGCCTTATGTGATGTTCACCTCTCGACGTCCGGTTCCAA 695
BSNT_00322___ 696 TGAAG--CCTTGATTCGAAGTGCAGCCACTTCCTCCCGCCTCGCCCAGCT 743
||||| |||| ||||.|||||||||||||||||..|..|.||.|||||
BPUM_0157 696 TGAAGCACCTT--TTCGCAGTGCAGCCACTTCCTCTAGAATGGCACAGCT 743
BSNT_00322___ 744 TTTTATAATTGATGTTTTGTTTTTAGGCATGGCGGCTGAG--------CA 785
.|...||||||||||.|||||..| |.|||.|| ||
BPUM_0157 744 CTACTTAATTGATGTCTTGTTCCT--------CAGCTTAGCTTCCCGTCA 785
BSNT_00322___ 786 GTATGAAACGACAACCGGTTATATAGATAAAACGAGAGCA-GCCATACAA 834
.||||||..||||.|....|||||.|||||.||.||| || |||||.|..
BPUM_0157 786 ATATGAAGAGACAGCGCAATATATTGATAAGACAAGA-CATGCCATCCGC 834
BSNT_00322___ 835 T--ATGAGAATAAAATAAGGCATCTTGAAGGGGAGGGGTTTTAA----- 876
| ||||.|..|||||.| ||| ||||.||.||
BPUM_0157 835 TCCATGAAACGAAAATCA---------AAG----GGGGATTCAACATGA 870
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