Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00306 and BPUM_0152

See DNA alignment / Visit BSNT_00306 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:13
# Commandline: needle
#    -asequence pep-align/BSNT_00306___ybaS.1.24716.seq
#    -bsequence pep-align/BPUM_0152.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00306___ybaS-BPUM_0152.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00306___ybaS-BPUM_0152.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00306___ybaS
# 2: BPUM_0152
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     200/321 (62.3%)
# Similarity:   250/321 (77.9%)
# Gaps:          15/321 ( 4.7%)
# Score: 1052.0
# 
#
#=======================================

BSNT_00306___      1 ------------MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFAGS     38
                                 ||.:||.||:|||||:.:|..:.:.|||:||.:||:||
BPUM_0152          1 MLVRLNQVLGRMMPFITPISVLLGVLLAAYLKDFTFMVPWVFAIMTFSGS     50

BSNT_00306___     39 LSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTITG     88
                     ||:.|.:|:|.:.||||:||:..:||:.|||:||.:|||||.||.:||||
BPUM_0152         51 LSSTFSALKHTVMHPLPLILSFMILHVLMPLYAWSAGHLIFAGDSMTITG    100

BSNT_00306___     89 LTLAVVIPTGITSLIWAAMYKGNVGLTLSIILIDTVLSPLIVPLSLSLLA    138
                     ||||:|||||::|||||||||||||||||||||||:|||||||:||||..
BPUM_0152        101 LTLAMVIPTGVSSLIWAAMYKGNVGLTLSIILIDTLLSPLIVPVSLSLFV    150

BSNT_00306___    139 GAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSPERTASVSSALSPFSK    188
                     |.|||||:..:||||..|||:||.||||..|.:.|..|.::|..|:||||
BPUM_0152        151 GTQVHMDMVAIMKGLFGMVVLPSILGMLVRQYAKPSVTKAMSQTLAPFSK    200

BSNT_00306___    189 LCLMAVIAINSSAIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMM    238
                     |.|..|::||||.:|||.:.:|..|...|.||||||::|||.||||||:|
BPUM_0152        201 LGLFVVVSINSSVVAPYLRELDAAFFSKAATVFFIAMSGYAFAWLIGKVM    250

BSNT_00306___    239 KRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAA    288
                     |..|.|||::::||||||||||||||::|||..|||||||||||||:|||
BPUM_0152        251 KCTQGEIVAIVYTGGMRNISAGAVLAISFFPPAVAVPVVIGMLFQQVLAA    300

BSNT_00306___    289 LFGYMLNRFELK-PMLQKA--    306
                     |||.:||||||| |.:.|:  
BPUM_0152        301 LFGSLLNRFELKAPAVTKSLT    321


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