Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00264 and BPUM_0146
See
DNA alignment /
Visit
BSNT_00264 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:13
# Commandline: needle
# -asequence pep-align/BSNT_00264___gerD.1.24716.seq
# -bsequence pep-align/BPUM_0146___gerD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00264___gerD-BPUM_0146___gerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00264___gerD-BPUM_0146___gerD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00264___gerD
# 2: BPUM_0146___gerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 128/191 (67.0%)
# Similarity: 164/191 (85.9%)
# Gaps: 6/191 ( 3.1%)
# Score: 674.5
#
#
#=======================================
BSNT_00264___ 1 MSKAKTLLMSCFLLLSVTACAPKDQ-AADMDYDQTKKMVVDILKTDDGKK 49
|||....:||||||||:||||||.| :::||||:||||||||||||||||
BPUM_0146___g 1 MSKGILRIMSCFLLLSLTACAPKTQSSSNMDYDETKKMVVDILKTDDGKK 50
BSNT_00264___ 50 AIKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAE 99
||::||||:|||||||:|:..:|.||||||||.||:||||.:|||:.|||
BPUM_0146___g 51 AIQQLLNDEAMNEALVMDEQTVKQTIEKTLTSDKGKEFWKKVFEDSKFAE 100
BSNT_00264___ 100 GFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFR 149
.|||::|.:|||::|:||||||||:::|.:::||.|:|||.:|.||:|||
BPUM_0146___g 101 TFAKSMQQQHEKMLKQLMKDPDYQQLMMDILKDPEMEKKYGELVKSKEFR 150
BSNT_00264___ 150 SYLEEVINETLSSPLYKKQFEDELKKAAKDT----AKESE- 185
.:||:||.||||||||||:|||||||||.:: :|||.
BPUM_0146___g 151 KHLEKVITETLSSPLYKKKFEDELKKAASESSDSGSKESGS 191
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.