Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00262 and BPUM_0144

See DNA alignment / Visit BSNT_00262 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:13
# Commandline: needle
#    -asequence pep-align/BSNT_00262___cwlD.1.24716.seq
#    -bsequence pep-align/BPUM_0144___cwlD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00262___cwlD-BPUM_0144___cwlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00262___cwlD-BPUM_0144___cwlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00262___cwlD
# 2: BPUM_0144___cwlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     178/237 (75.1%)
# Similarity:   213/237 (89.9%)
# Gaps:           0/237 ( 0.0%)
# Score: 993.0
# 
#
#=======================================

BSNT_00262___      1 MRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIYLDPGHG     50
                     |::||||..||:|||:|||||::||.|:||||.|:|||||||||||||||
BPUM_0144___c      1 MKRKLKWTGFLIGFIVLLFLFRFQFLNDDSWKSWNLPLSGKIIYLDPGHG     50

BSNT_00262___     51 GPDGGAVGGKLLEKDVTLEVAFRVRDYLQEQGALVIMTRESDTDLAPEGT    100
                     |||||||||:||||::.|:|:.::|||||||||||:||||.|:||:.:.|
BPUM_0144___c     51 GPDGGAVGGELLEKEIALDVSMKIRDYLQEQGALVLMTREDDSDLSSKNT    100

BSNT_00262___    101 KGYSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKY    150
                     |||:|:||||||.|||.||.|||:.|:|||||||||.||||||:|:||||
BPUM_0144___c    101 KGYARKKAEDLRNRVKAINESEADFYLSIHLNAIPSNKWSGAQTFFYGKY    150

BSNT_00262___    151 AENEKVAKYIQDELRRNLENTTRKAKRIHGIYLMQNVTKPGALIEVGFLS    200
                     .||||.||:||||||.|||||.||||||:||||||||||||||:|:||||
BPUM_0144___c    151 EENEKAAKFIQDELRNNLENTDRKAKRINGIYLMQNVTKPGALVEIGFLS    200

BSNT_00262___    201 NPSEATLLGKPKYQDKVASSIYKGILRYFTEKGDPPE    237
                     ||.||:.|..|||||::|:|||||||||.||:.:|||
BPUM_0144___c    201 NPKEASQLATPKYQDQIAASIYKGILRYLTEQKEPPE    237


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