Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00262 and BPUM_0144
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:13
# Commandline: needle
# -asequence dna-align/BSNT_00262___cwlD.1.24716.seq
# -bsequence dna-align/BPUM_0144___cwlD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00262___cwlD-BPUM_0144___cwlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00262___cwlD-BPUM_0144___cwlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00262___cwlD
# 2: BPUM_0144___cwlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 726
# Identity: 521/726 (71.8%)
# Similarity: 521/726 (71.8%)
# Gaps: 24/726 ( 3.3%)
# Score: 1679.0
#
#
#=======================================
BSNT_00262___ 1 ATGAGGAAAAAGCTTAAATGGCTCA-GTTTTTTGCTAGGCTTCATCATAT 49
||||..|.||||||.|||||| .|| |||||||..|.||.||.|||.|..
BPUM_0144___c 1 ATGAAAAGAAAGCTGAAATGG-ACAGGTTTTTTAATCGGGTTTATCGTCC 49
BSNT_00262___ 50 TACTATTTCTGTTCAAGTATCAGTTCAGCAATAACGACTCTTGGAAGCCG 99
|..||||..|.||||.||.||||||....|||.|.||.||.|||||..||
BPUM_0144___c 50 TCTTATTCTTATTCAGGTTTCAGTTTCTAAATGATGATTCGTGGAAATCG 99
BSNT_00262___ 100 TGGAGCCTGCCCTTGAGCGGTAAAATCATTTATCTAGATCCAGGTCATGG 149
||||.|.||||.||||||||.||.|||||.|||.|||||||.||||||||
BPUM_0144___c 100 TGGAACTTGCCTTTGAGCGGCAAGATCATCTATTTAGATCCGGGTCATGG 149
BSNT_00262___ 150 CGGGCCTGACGGCGGAGCAGTCGGCGGAAAGCTGTTAGAGAAGGATGTTA 199
|||.||.||.|||||.||.||.||.|||.||.||.|.||.||.||..||.
BPUM_0144___c 150 CGGTCCAGATGGCGGGGCTGTTGGAGGAGAGTTGCTTGAAAAAGAGATTG 199
BSNT_00262___ 200 CCCTGGAAGTGGCCTTTAGAG-TCAGGGATTATCTTCAAGAACAAGGAGC 248
|.||.||.||..||.|.| || |..|.||.|||.|.||.||.||.||.||
BPUM_0144___c 200 CACTAGATGTATCCATGA-AGATACGTGACTATTTACAGGAGCAGGGTGC 248
BSNT_00262___ 249 GCTTGTTATCATGACCAGAGAAAGTGATACTGATCTCGCTCCAGAAGGA- 297
.||||||.|.||||||.|.|||..||||.|||||.|..|..|| |||.|
BPUM_0144___c 249 CCTTGTTCTTATGACCCGCGAAGATGATTCTGATTTATCATCA-AAGAAC 297
BSNT_00262___ 298 ACAAAAGGCTATAGC-CGACGA--AAAGCTGAGGATCTAAGACAACGAGT 344
|||||.||.||| || || || |||||.||||||.|||||.|.||.||
BPUM_0144___c 298 ACAAAGGGATAT-GCTCG--GAAGAAAGCGGAGGATTTAAGAAACCGTGT 344
BSNT_00262___ 345 CAAATTAATAAACCATTCAGAGGCGGAGCTCTATATCAGCATTCATCTTA 394
.|||...||.||..|.||.||.|||||..|||||.|.||.||||||.|.|
BPUM_0144___c 345 AAAAGCCATCAATGAGTCTGAAGCGGATTTCTATTTAAGTATTCATTTAA 394
BSNT_00262___ 395 ATGCGATTCCGTCACAAAAATGGAGCGGCGCCCAAAGCTTTTATTACGGG 444
|||||||.||.|||.|.||||||||||||||.||.|..||||.|||||||
BPUM_0144___c 395 ATGCGATCCCATCAAACAAATGGAGCGGCGCACAGACGTTTTTTTACGGG 444
BSNT_00262___ 445 AAATATGCGGAAAATGAGAAAGTC-GCAAAATACATTCAGGATGAGCTGA 493
|||||||..||.||||| ||||.| ||.||.|.||||||.|||||..|..
BPUM_0144___c 445 AAATATGAAGAGAATGA-AAAGGCAGCGAAGTTCATTCAAGATGAATTAC 493
BSNT_00262___ 494 GAAGAAATCTGGAAAACACAACCCGGAAAGCAAAGCGGATTCATGGTATC 543
|.|..|||||.|||||||||...||.||.||.||||||||..||||.||.
BPUM_0144___c 494 GCAATAATCTTGAAAACACAGATCGAAAGGCGAAGCGGATCAATGGCATT 543
BSNT_00262___ 544 TACTTAATGCAAAACGTCACCAAACCGGGGGCGCTTATAGAAGTCGGGTT 593
||.|||||||||||.||.||.||.||.||.||.|||.|.||..|.||.||
BPUM_0144___c 544 TATTTAATGCAAAATGTGACGAAGCCAGGAGCTCTTGTGGAGATTGGATT 593
BSNT_00262___ 594 TTTATCCAATCCAAGTGAAGCAACGT-TGCTCGGTAA-ACCGAAATATCA 641
|.|.||||||||.|..||.||.| || .||| ||.|| |||.||||||||
BPUM_0144___c 594 TCTCTCCAATCCGAAAGAGGCCA-GTCAGCT-GGCAACACCTAAATATCA 641
BSNT_00262___ 642 AGA-CAAGGTGGCATCTTCCATATATAAAGGCATTTTGCGATATTTCACA 690
||| ||| .|.||..|.|||||.||||||||||||||..|||||||.|||
BPUM_0144___c 642 AGATCAA-ATTGCTGCCTCCATTTATAAAGGCATTTTAAGATATTTGACA 690
BSNT_00262___ 691 GA--AAAAGGAGACCCTCCGGAGTAA 714
|| |||| |||.||.||.||.|||
BPUM_0144___c 691 GAGCAAAA--AGAGCCGCCTGAATAA 714
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