Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00254 and BPUM_0136

See DNA alignment / Visit BSNT_00254 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence pep-align/BSNT_00254___rplM.1.24716.seq
#    -bsequence pep-align/BPUM_0136___rplM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00254___rplM-BPUM_0136___rplM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00254___rplM-BPUM_0136___rplM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00254___rplM
# 2: BPUM_0136___rplM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:     137/145 (94.5%)
# Similarity:   142/145 (97.9%)
# Gaps:           0/145 ( 0.0%)
# Score: 727.0
# 
#
#=======================================

BSNT_00254___      1 MRTTPMANASTIERKWLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVD     50
                     ||||||||||||||||||||||||||||||:|||::||||||||||||||
BPUM_0136___r      1 MRTTPMANASTIERKWLVVDAAGKTLGRLSTEVASLLRGKHKPTYTPHVD     50

BSNT_00254___     51 TGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEK    100
                     |||||||||||||||||||||||||||||.||||||.|||||||||||||
BPUM_0136___r     51 TGDHVIIINAEKIELTGKKLTDKIYYRHTMHPGGLKQRTALEMRTNYPEK    100

BSNT_00254___    101 MLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYELRG    145
                     |||||||||||||.|||||||||||||||||||:||:||||||||
BPUM_0136___r    101 MLELAIKGMLPKGPLGRQMFKKLNVYRGSEHPHQAQQPEVYELRG    145


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