Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00252 and BPUM_0134

See DNA alignment / Visit BSNT_00252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence pep-align/BSNT_00252___ybaF.1.24716.seq
#    -bsequence pep-align/BPUM_0134___ybaF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00252___ybaF-BPUM_0134___ybaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00252___ybaF-BPUM_0134___ybaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00252___ybaF
# 2: BPUM_0134___ybaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     201/265 (75.8%)
# Similarity:   233/265 (87.9%)
# Gaps:           0/265 ( 0.0%)
# Score: 1043.0
# 
#
#=======================================

BSNT_00252___      1 MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGL     50
                     |||||||||||||||.||||||||||::||.||.|||.|||..||.|||:
BPUM_0134___y      1 MMDSMIIGKYVPGTSFVHRLDPRTKLLSIFFFVFIVFFANNYITYGLLGI     50

BSNT_00252___     51 FTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFF    100
                     ||:.||.:::||..|::||:|||:|||||||:|||.||.:|.::|..||.
BPUM_0134___y     51 FTLLVVMVSQVPLYFILKGMKPILWIVLFTFILHIFMTKDGALLFHFGFL    100

BSNT_00252___    101 KVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKL    150
                     .:||.||.|||||||||||||::||||||||||||:|||||:||:|.:|:
BPUM_0134___y    101 NIYEEGLKQGIFISLRFVYLIMMTTLLTLTTTPIEVTDGMEKLLHPFRKI    150

BSNT_00252___    151 KLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKA    200
                     |||||||||||||||||||||:|||||||||||||||||||||:|:|:||
BPUM_0134___y    151 KLPVHELALMMSISLRFIPTLLEETDKIMKAQMARGVDFTSGPLKDRMKA    200

BSNT_00252___    201 IVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVI    250
                     ||||||||||||||||||||.|||||||:|||||||||:|||..|||..:
BPUM_0134___y    201 IVPLLVPLFVSAFKRAEELATAMEARGYRGGEGRTKYRQLVWGMKDTFTL    250

BSNT_00252___    251 VSLIVLAALLFFLRA    265
                     :..|:|.|||..||.
BPUM_0134___y    251 LLFILLTALLVLLRN    265


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