Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00250 and BPUM_0132

See DNA alignment / Visit BSNT_00250 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence pep-align/BSNT_00250___ybxA.1.24716.seq
#    -bsequence pep-align/BPUM_0132___cbiO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00250___ybxA-BPUM_0132___cbiO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00250___ybxA-BPUM_0132___cbiO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00250___ybxA
# 2: BPUM_0132___cbiO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     221/281 (78.6%)
# Similarity:   252/281 (89.7%)
# Gaps:           1/281 ( 0.4%)
# Score: 1137.0
# 
#
#=======================================

BSNT_00250___      1 MNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKST     50
                     |.:. ||.|:||||||.||||:.|||.|||.|.:.|||||||||||||||
BPUM_0132___c      1 MGKT-LIDVKDIVFRYHKDAEKPALDQVSLHVNQNEWLAIVGHNGSGKST     49

BSNT_00250___     51 LARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTT    100
                     |||.|||||||::|.::|..|:|.|||||::|||:|||||||||||||:|
BPUM_0132___c     50 LARVLNGLILPDAGTVKVGEIELKEESVWDIRKKVGMVFQNPDNQFVGST     99

BSNT_00250___    101 VRDDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLDQEPHHLSGGQKQR    150
                     ||||||||||||||.||.|||||||||||||||:||||||||||||||||
BPUM_0132___c    100 VRDDVAFGLENNGVERELMIERVDWAVKQVNMQEFLDQEPHHLSGGQKQR    149

BSNT_00250___    151 VAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISIT    200
                     ||||||:||.|||:||||||||||||||||||||||.|||||..||||||
BPUM_0132___c    150 VAIAGVLAASPDIMILDEATSMLDPIGREEVLETVRLLKEQGTVTVISIT    199

BSNT_00250___    201 HDLDEAAKADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLS    250
                     |||||||||||:||||||||:|||.|||:|:|:::||:||||||||::||
BPUM_0132___c    200 HDLDEAAKADRVIVMNGGKKFAEGTPEEVFELDEQLVQIGLDLPFSYRLS    249

BSNT_00250___    251 QLLRENGLALEENHLTQEGLVKELWTLQSKM    281
                     :.|::.|:.|...||||||||||||||:||.
BPUM_0132___c    250 KQLKQQGVPLANAHLTQEGLVKELWTLRSKN    280


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