Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00250 and BPUM_0132
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence dna-align/BSNT_00250___ybxA.1.24716.seq
# -bsequence dna-align/BPUM_0132___cbiO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00250___ybxA-BPUM_0132___cbiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00250___ybxA-BPUM_0132___cbiO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00250___ybxA
# 2: BPUM_0132___cbiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity: 632/861 (73.4%)
# Similarity: 632/861 (73.4%)
# Gaps: 33/861 ( 3.8%)
# Score: 2226.5
#
#
#=======================================
BSNT_00250___ 1 AT---GAATCAAAATCAGTTGATATCGGTAGAGGATATCGTATTTCGATA 47
|| ||| .|.||.|.|||| .|||.||||.||.||||||||.||
BPUM_0132___c 1 ATGGGGAA--GACATTAATTGA----CGTAAAGGACATTGTATTTCGTTA 44
BSNT_00250___ 48 TCGGAAGGACGCAGA-AAGACGAGCACTAGACGGCGTCTCCCTGCAGGTG 96
||..|||||.||.|| ||| |..||..||||....||.||..||||.|||
BPUM_0132___c 45 TCACAAGGATGCGGAGAAG-CCCGCTTTAGATCAAGTGTCATTGCATGTG 93
BSNT_00250___ 97 TATGAGGGTGAATGGCTTGCAATCGTAGGTCATAACGGTTCAGGGAAATC 146
.||.|...|||||||||.||.||.||.|||||||||||||||||.|||||
BPUM_0132___c 94 AATCAAAATGAATGGCTCGCCATTGTTGGTCATAACGGTTCAGGTAAATC 143
BSNT_00250___ 147 AACACTGGCCCGGGCATTGAATGGTTTAATTCTTCCTGAATCAGG---CG 193
.|||||.|||||.|.|.|||||||..|.|||.|.||.||..|.|| .|
BPUM_0132___c 144 CACACTTGCCCGTGTACTGAATGGGCTCATTTTACCGGATGCTGGAACGG 193
BSNT_00250___ 194 ACATTGAGGTTGCCGGGATTCAATTGACAGAGGAATCTGTTTGGGAAGTG 243
.|| ||||||..|.||||.|..|.|.|||.||...|||.|||||..|.
BPUM_0132___c 194 TCA---AGGTTGGAGAGATTGAGCTAAAAGAAGAGAGTGTCTGGGATATT 240
BSNT_00250___ 244 CGTAAGAAGATAGGTATGGTCTTTCAAAATCCGGATAACCAATTTGTCGG 293
||.||.||..|.||.||||||||||||||.||.|||||||||||.||.||
BPUM_0132___c 241 CGCAAAAAAGTCGGAATGGTCTTTCAAAACCCAGATAACCAATTCGTTGG 290
BSNT_00250___ 294 AACGACTGTTCGCGATGATGTGGCTTTTGGTTTAGAAAACAATGGTGTAC 343
..|.||.|||||.||||||||||||||||||||||||||.|||||.||..
BPUM_0132___c 291 CTCAACGGTTCGTGATGATGTGGCTTTTGGTTTAGAAAATAATGGGGTTG 340
BSNT_00250___ 344 CGCGGGAAGAAATGATTGAGAGAGTAGACTGGGCAGTAAAACAGGTTAAT 393
.|||||||...|||||.||..|.|||||.|||||.||.||||||||.|||
BPUM_0132___c 341 AGCGGGAACTGATGATAGAACGTGTAGATTGGGCTGTGAAACAGGTCAAT 390
BSNT_00250___ 394 ATGCAAGATTTTCTCGATCAAGAGCCGCACCATCTCTCCGGAGGCCAAAA 443
|||||.||.|||||.||||||||||||||||||||.||.||.||.|||||
BPUM_0132___c 391 ATGCAGGAGTTTCTTGATCAAGAGCCGCACCATCTATCAGGCGGGCAAAA 440
BSNT_00250___ 444 GCAGAGAGTTGCGATTGCGGGGGTTATTGCCGCACGTCCTGATATTATTA 493
|||||||||.||.|||||.||.||..||||||||.|.|||||.||.||.|
BPUM_0132___c 441 GCAGAGAGTCGCCATTGCAGGTGTACTTGCCGCAAGCCCTGACATCATGA 490
BSNT_00250___ 494 TCTTAGATGAAGCAACATCCATGCTTGATCCGATCGGGCGAGAAGAAGTG 543
||||.||||||||||||||.||||||||||||||.||.||.|||||||||
BPUM_0132___c 491 TCTTGGATGAAGCAACATCAATGCTTGATCCGATTGGCCGTGAAGAAGTG 540
BSNT_00250___ 544 CTTGAAACGGTAAGACATTTAAAAGAGCAGGGCATGGCGACTGTCATATC 593
.|.||.||.||.||||...|.||.||.||.||.|.||..||.|||||.||
BPUM_0132___c 541 TTAGAGACTGTTAGACTACTGAAGGAACAAGGAACGGTCACAGTCATTTC 590
BSNT_00250___ 594 CATTACACATGATCTGGATGAGGCAGCAAAAGCAGACAGGATCATTGTCA 643
|||.|||||||||.|.||.||.||.||.||.||||||.||.|||||||||
BPUM_0132___c 591 CATCACACATGATTTAGACGAAGCCGCCAAGGCAGACCGGGTCATTGTCA 640
BSNT_00250___ 644 TGAATGGCGGTAAAAAATATGCTGAAGGGCCGCCTGAAGAGATTTTTAAA 693
||||||||||.|||||||.|||.||.||..|.||.||.||..|||||.||
BPUM_0132___c 641 TGAATGGCGGGAAAAAATTTGCCGAGGGAACCCCAGAGGAAGTTTTTGAA 690
BSNT_00250___ 694 TTGAATAAAGAACTTGTTCGAATCGGGCTTGATTTACCCTTCTCATTCCA 743
||..|..|..|.||.||||.|||.||.||||||.|.||.|||||.|..|.
BPUM_0132___c 691 TTAGACGAGCAGCTAGTTCAAATTGGACTTGATCTGCCATTCTCCTATCG 740
BSNT_00250___ 744 GCTTAGCCAGC-TTTTAAG-AGAAAATGG---ACTGGCTTTGGAAGAAAA 788
|.|.|||.|.| .||.||| ||.|| || || .|||| |.|||
BPUM_0132___c 741 GTTGAGCAAACAATTGAAGCAGCAA--GGCGTAC-CGCTT-----GCAAA 782
BSNT_00250___ 789 ---CCATTTGACTCAGGAAGGGCTGGTGAAAGAGCTGTGGACATTACAAT 835
|||||||||.||.|||||..|||||||||||||.||||||||||.||
BPUM_0132___c 783 TGCCCATTTGACACAAGAAGGATTGGTGAAAGAGCTATGGACATTACGAT 832
BSNT_00250___ 836 CAAAGATGTAG 846
||||||..|||
BPUM_0132___c 833 CAAAGAATTAG 843
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