Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00248 and BPUM_0130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:12
# Commandline: needle
# -asequence pep-align/BSNT_00248___rpoA.1.24716.seq
# -bsequence pep-align/BPUM_0130___rpoA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00248___rpoA-BPUM_0130___rpoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00248___rpoA-BPUM_0130___rpoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00248___rpoA
# 2: BPUM_0130___rpoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity: 304/314 (96.8%)
# Similarity: 311/314 (99.0%)
# Gaps: 0/314 ( 0.0%)
# Score: 1532.0
#
#
#=======================================
BSNT_00248___ 1 MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPG 50
|||||||||||||||||||:||||||||||||||||||||||||||||||
BPUM_0130___r 1 MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPG 50
BSNT_00248___ 51 AAVTSIQIDGVLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEID 100
||||||||||||||||||||||||||||||:||||||||||:||||||||
BPUM_0130___r 51 AAVTSIQIDGVLHEFSTIEGVVEDVTTIILNIKKLALKIYSEEEKTLEID 100
BSNT_00248___ 101 VQGEGTVTAADITHDSDVEILNPDLHIATLGENASFRVRLTAQRGRGYTP 150
||.||||||||||||||:|||||||||||||:||||||||||||||||.|
BPUM_0130___r 101 VQDEGTVTAADITHDSDIEILNPDLHIATLGKNASFRVRLTAQRGRGYNP 150
BSNT_00248___ 151 ADANKRDDQPIGVIPIDSIYTPVSRVSYQVENTRVGQVANYDKLTLDVWT 200
||||||||||||||||||||||||||:||||||||||:.|||||||||||
BPUM_0130___r 151 ADANKRDDQPIGVIPIDSIYTPVSRVTYQVENTRVGQITNYDKLTLDVWT 200
BSNT_00248___ 201 DGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLE 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0130___r 201 DGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEKEEDQKEKVLE 250
BSNT_00248___ 251 MTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0130___r 251 MTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK 300
BSNT_00248___ 301 AKLEELGLGLRKDD 314
||||||||||||||
BPUM_0130___r 301 AKLEELGLGLRKDD 314
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