Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00240 and BPUM_0122
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence pep-align/BSNT_00240___secY.1.24716.seq
# -bsequence pep-align/BPUM_0122___secY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00240___secY-BPUM_0122___secY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00240___secY-BPUM_0122___secY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00240___secY
# 2: BPUM_0122___secY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity: 364/431 (84.5%)
# Similarity: 398/431 (92.3%)
# Gaps: 1/431 ( 0.2%)
# Score: 1878.0
#
#
#=======================================
BSNT_00240___ 1 MFKTISNFMRVSDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQM 50
|||||||||||.|||||||||||||||||||||||||.||||.||||.||
BPUM_0122___s 1 MFKTISNFMRVKDIRNKIIFTLLMLIVFRIGAFIPVPNVNAEVLQAQDQM 50
BSNT_00240___ 51 GVFDLLNTFGGGALYQFSIFAMGITPYITASIIIQLLQMDVVPKFTEWSK 100
.||.:|||||||||:||||.||||.|||||||||||||||||||||||||
BPUM_0122___s 51 SVFGILNTFGGGALFQFSILAMGIMPYITASIIIQLLQMDVVPKFTEWSK 100
BSNT_00240___ 101 QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLANGMLIEKSGVSTYL 150
||||||||||||||||||||||||||||||||||:|.|||||..||||||
BPUM_0122___s 101 QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNMAGGMLIENPGVSTYL 150
BSNT_00240___ 151 IIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGIVSSIPKTIGQIYE 200
:||:|||.|||||||||||||:|||||||||||||||::.||:|:.|:|.
BPUM_0122___s 151 LIAVVLTAGTAFLMWLGEQITAHGVGNGISIIIFAGIIAGIPQTLKQVYA 200
BSNT_00240___ 201 TQFVGSNDQLFIHIVKVALLVIAILAVIVGVIFIQQAVRKIAIQYAKGTG 250
.||||.:.|||:.|:|:||:|||||.:::|||:||.|||||||||:||||
BPUM_0122___s 201 QQFVGGDGQLFMQILKIALIVIAILVIVIGVIYIQMAVRKIAIQYSKGTG 250
BSNT_00240___ 251 RSPAGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGTNDVTKWI 300
|:.....|:|||||||||||||||||||:|:|||:|:|||||||:||.||
BPUM_0122___s 251 RAQMSASQATHLPLKVNPAGVIPVIFAVSFIITPQTVASFFGTNNVTTWI 300
BSNT_00240___ 301 QNNFDNTHPVGMAIYVALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGV 350
.||||.|.|:||.||||||:|||||||||||||||||:||:|||||||||
BPUM_0122___s 301 TNNFDYTKPIGMTIYVALIVAFTYFYAFVQVNPEQMAENLQKQGGYIPGV 350
BSNT_00240___ 351 RPGKMTQDRITSILYRLTFVGSIFLAVISILPIFFIQFAGLPQSAQIGGT 400
|||||||||||||||||||||:||||||||||||||||||||.:||||||
BPUM_0122___s 351 RPGKMTQDRITSILYRLTFVGAIFLAVISILPIFFIQFAGLPSAAQIGGT 400
BSNT_00240___ 401 SLLIVVGVALETMKQLESQLVKRNYRGFMKN 431
||||||||||||||||||||||||||||||
BPUM_0122___s 401 SLLIVVGVALETMKQLESQLVKRNYRGFMK- 430
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