Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00235 and BPUM_0117
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence pep-align/BSNT_00235___rplF.1.24716.seq
# -bsequence pep-align/BPUM_0117___rplF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00235___rplF-BPUM_0117___rplF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00235___rplF-BPUM_0117___rplF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00235___rplF
# 2: BPUM_0117___rplF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity: 155/184 (84.2%)
# Similarity: 169/184 (91.8%)
# Gaps: 6/184 ( 3.3%)
# Score: 809.0
#
#
#=======================================
BSNT_00235___ 1 -----MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIK 45
|||:||||:||||.||||.|| |||.|||||||||||||||||||
BPUM_0117___r 1 MEVLGMSRIGKKLIEIPSGVTVTNND-NTVTVKGPKGELTRTFHPDMEIK 49
BSNT_00235___ 46 VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGY 95
:||:||||:||||.|||||||||||||:.||||||||||||||||:||||
BPUM_0117___r 50 IEDSVLTVSRPSDHKEHRALHGTTRSLIANMVEGVSKGFERGLELIGVGY 99
BSNT_00235___ 96 RASKSGNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAI 145
||:|||||||||||||||||||||.|:|:|||||||||:||.|||||||:
BPUM_0117___r 100 RAAKSGNKLVLNVGYSHPVEIVPEAGVEVEVPSQTKVVIKGIDKERVGAL 149
BSNT_00235___ 146 AANIRAVRSPEPYKGKGIRYEGEVVRRKEGKSAK 179
|:|||||||||||||||||||||.|||||||:.|
BPUM_0117___r 150 ASNIRAVRSPEPYKGKGIRYEGEFVRRKEGKTGK 183
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