Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00234 and BPUM_0116

See DNA alignment / Visit BSNT_00234 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00234___rpsH.1.24716.seq
#    -bsequence pep-align/BPUM_0116___rpsH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00234___rpsH-BPUM_0116___rpsH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00234___rpsH-BPUM_0116___rpsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00234___rpsH
# 2: BPUM_0116___rpsH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:     126/132 (95.5%)
# Similarity:   132/132 (100.0%)
# Gaps:           0/132 ( 0.0%)
# Score: 639.0
# 
#
#=======================================

BSNT_00234___      1 MVMTDPIADMLTRIRNANMVRHEKLEIPASKLKREIAEILKREGFIRDVE     50
                     |||||||||:||||||||||||||||:||||:||||||||||||||||||
BPUM_0116___r      1 MVMTDPIADLLTRIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDVE     50

BSNT_00234___     51 FVEDSKQGIIRVFLKYGQNNERVITGLKRISKPGLRVYAKSNEVPRVLNG    100
                     :||||||||||:||||||||||||||||||||||||||||||||||||||
BPUM_0116___r     51 YVEDSKQGIIRMFLKYGQNNERVITGLKRISKPGLRVYAKSNEVPRVLNG    100

BSNT_00234___    101 LGIAIISTSQGVLTDKEARAKQAGGEVLAYVW    132
                     |||||||||||||:||||||||||||||||||
BPUM_0116___r    101 LGIAIISTSQGVLSDKEARAKQAGGEVLAYVW    132


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