Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00234 and BPUM_0116
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_00234___rpsH.1.24716.seq
# -bsequence dna-align/BPUM_0116___rpsH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00234___rpsH-BPUM_0116___rpsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00234___rpsH-BPUM_0116___rpsH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00234___rpsH
# 2: BPUM_0116___rpsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 354/399 (88.7%)
# Similarity: 354/399 (88.7%)
# Gaps: 0/399 ( 0.0%)
# Score: 1590.0
#
#
#=======================================
BSNT_00234___ 1 ATGGTTATGACAGATCCAATTGCAGATATGCTAACTCGTATTCGCAATGC 50
|||||||||||||||||.|||||||||.||||.|||||||||||||||||
BPUM_0116___r 1 ATGGTTATGACAGATCCGATTGCAGATTTGCTGACTCGTATTCGCAATGC 50
BSNT_00234___ 51 AAACATGGTACGTCATGAGAAGCTTGAAATTCCTGCTTCTAAATTGAAAA 100
.|||||||||||||||||||||||.|||.|.||.|||||.|||.|.||||
BPUM_0116___r 51 GAACATGGTACGTCATGAGAAGCTAGAAGTACCGGCTTCAAAAATCAAAA 100
BSNT_00234___ 101 GAGAAATTGCTGAAATTTTAAAGCGTGAAGGTTTCATTCGTGACGTTGAG 150
||||||||||||||||.|||||||||||||||||.||.|||||||||||.
BPUM_0116___r 101 GAGAAATTGCTGAAATCTTAAAGCGTGAAGGTTTTATCCGTGACGTTGAA 150
BSNT_00234___ 151 TTCGTAGAAGACAGCAAACAAGGTATTATCCGCGTTTTCTTGAAATACGG 200
|..||.|||||||||||||||||.||||||||..|.|||.|.|||||.||
BPUM_0116___r 151 TATGTTGAAGACAGCAAACAAGGAATTATCCGTATGTTCCTTAAATATGG 200
BSNT_00234___ 201 ACAAAACAACGAGCGCGTTATCACTGGTCTTAAAAGAATCAGCAAGCCTG 250
.|||||||||||.||.||||||||||||||.|||||||||||.||.||||
BPUM_0116___r 201 CCAAAACAACGAACGTGTTATCACTGGTCTAAAAAGAATCAGTAAACCTG 250
BSNT_00234___ 251 GTTTGCGTGTTTATGCTAAATCTAATGAAGTACCTCGCGTACTTAACGGT 300
||||.|||||.|||||.|||||.|||||||||||.||.|||||||||||.
BPUM_0116___r 251 GTTTACGTGTATATGCGAAATCAAATGAAGTACCACGTGTACTTAACGGA 300
BSNT_00234___ 301 CTTGGAATCGCGATTATTTCTACATCACAAGGTGTTTTAACGGACAAAGA 350
|||||||||||.|||||||||||||||||||||||||||.||||||||||
BPUM_0116___r 301 CTTGGAATCGCAATTATTTCTACATCACAAGGTGTTTTATCGGACAAAGA 350
BSNT_00234___ 351 AGCCCGTGCAAAACAAGCTGGTGGAGAAGTTCTAGCATACGTTTGGTAA 399
|||||||||.||||||||||||||||||||.||.||.|||||.||||||
BPUM_0116___r 351 AGCCCGTGCTAAACAAGCTGGTGGAGAAGTACTTGCTTACGTATGGTAA 399
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