Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00232 and BPUM_0114

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00232___rplE.1.24716.seq
#    -bsequence pep-align/BPUM_0114___rplE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00232___rplE-BPUM_0114___rplE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00232___rplE-BPUM_0114___rplE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00232___rplE
# 2: BPUM_0114___rplE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     171/179 (95.5%)
# Similarity:   175/179 (97.8%)
# Gaps:           0/179 ( 0.0%)
# Score: 858.0
# 
#
#=======================================

BSNT_00232___      1 MNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAI     50
                     ||||||||.|||.|||::||.|.|||||||||||||||||||||||||||
BPUM_0114___r      1 MNRLKEKYVKEITPALVSKFEYKSVMQVPKIEKIVINMGVGDAVQNAKAI     50

BSNT_00232___     51 DSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFL    100
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0114___r     51 DTAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFL    100

BSNT_00232___    101 DKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVR    150
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
BPUM_0114___r    101 DKLISVSLPRVRDFRGISKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVR    150

BSNT_00232___    151 GMDIVIVTTANTDEEARELLTQVGMPFQK    179
                     |||||||||||||||||||||||||||||
BPUM_0114___r    151 GMDIVIVTTANTDEEARELLTQVGMPFQK    179


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