Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00230 and BPUM_0112

See DNA alignment / Visit BSNT_00230 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00230___rplN.1.24716.seq
#    -bsequence pep-align/BPUM_0112___rplN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00230___rplN-BPUM_0112___rplN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00230___rplN-BPUM_0112___rplN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00230___rplN
# 2: BPUM_0112___rplN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:     118/122 (96.7%)
# Similarity:   122/122 (100.0%)
# Gaps:           0/122 ( 0.0%)
# Score: 594.0
# 
#
#=======================================

BSNT_00230___      1 MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKQATPGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0112___r      1 MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKQATPGG     50

BSNT_00230___     51 VVKKGEVVKAVIVRTKSGARRSDGSYISFDENACVIIRDDKSPRGTRIFG    100
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
BPUM_0112___r     51 VVKKGEVVKAVIVRTKSGARRNDGSYISFDENACVIIRDDKSPRGTRIFG    100

BSNT_00230___    101 PVARELRENNFMKIVSLAPEVI    122
                     |||||||:||:||||||||||:
BPUM_0112___r    101 PVARELRDNNYMKIVSLAPEVL    122


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