Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00230 and BPUM_0112
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_00230___rplN.1.24716.seq
# -bsequence dna-align/BPUM_0112___rplN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00230___rplN-BPUM_0112___rplN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00230___rplN-BPUM_0112___rplN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00230___rplN
# 2: BPUM_0112___rplN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 330/369 (89.4%)
# Similarity: 330/369 (89.4%)
# Gaps: 0/369 ( 0.0%)
# Score: 1494.0
#
#
#=======================================
BSNT_00230___ 1 ATGATTCAACAAGAGACTCGTTTAAAAGTAGCTGACAACTCTGGCGCACG 50
|||||||||||.||||||||||||||||||||||||||||||||||||||
BPUM_0112___r 1 ATGATTCAACAGGAGACTCGTTTAAAAGTAGCTGACAACTCTGGCGCACG 50
BSNT_00230___ 51 TGAAGTACTTACTATTAAAGTTCTTGGTGGTTCTGGACGTAAAACAGCTA 100
.||||||||.||.|||||||||||||||||.|||||||||||.||.||||
BPUM_0112___r 51 CGAAGTACTAACGATTAAAGTTCTTGGTGGCTCTGGACGTAAGACGGCTA 100
BSNT_00230___ 101 ACATTGGTGATGTAATTGTTTGCACGGTTAAACAAGCAACACCAGGAGGC 150
||||.||||||||.||||||||.|||||||||||||||||||||||||||
BPUM_0112___r 101 ACATCGGTGATGTCATTGTTTGTACGGTTAAACAAGCAACACCAGGAGGC 150
BSNT_00230___ 151 GTTGTCAAAAAAGGTGAAGTCGTAAAAGCTGTTATCGTTCGCACTAAAAG 200
||||||||||||||||||||.||.|||||.|||||||||||.||.||.||
BPUM_0112___r 151 GTTGTCAAAAAAGGTGAAGTTGTGAAAGCAGTTATCGTTCGTACAAAGAG 200
BSNT_00230___ 201 CGGAGCGCGCAGAAGTGACGGTTCATACATCAGCTTCGATGAGAATGCAT 250
||||||.|||||||..||.||.||.||||||||.|||||.||.|||||||
BPUM_0112___r 201 CGGAGCTCGCAGAAACGATGGATCTTACATCAGTTTCGACGAAAATGCAT 250
BSNT_00230___ 251 GTGTTATCATCCGTGACGACAAGAGCCCACGCGGAACTCGTATCTTCGGA 300
||||.||.||||||||.||||||||||||||.||||||||||||||||||
BPUM_0112___r 251 GTGTCATTATCCGTGATGACAAGAGCCCACGTGGAACTCGTATCTTCGGA 300
BSNT_00230___ 301 CCAGTTGCTCGTGAATTGCGTGAAAACAACTTTATGAAAATTGTTTCTCT 350
|||||.||.||||||.|.|||||.|||||||.||||||||||||||||||
BPUM_0112___r 301 CCAGTAGCACGTGAACTTCGTGACAACAACTATATGAAAATTGTTTCTCT 350
BSNT_00230___ 351 AGCTCCAGAAGTTATCTAA 369
|||.||||||||..|.|||
BPUM_0112___r 351 AGCACCAGAAGTACTTTAA 369
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