Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00229 and BPUM_0111

See DNA alignment / Visit BSNT_00229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00229___rpsQ.1.24716.seq
#    -bsequence pep-align/BPUM_0111___rpsQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00229___rpsQ-BPUM_0111___rpsQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00229___rpsQ-BPUM_0111___rpsQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00229___rpsQ
# 2: BPUM_0111___rpsQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      83/87 (95.4%)
# Similarity:    86/87 (98.9%)
# Gaps:           0/87 ( 0.0%)
# Score: 420.0
# 
#
#=======================================

BSNT_00229___      1 MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHD     50
                     |||||||||||||||||||||||||||||||||:||||||:||||.||||
BPUM_0111___r      1 MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHSLYGKRVRYSKKLKAHD     50

BSNT_00229___     51 ENNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII     87
                     ||||||||||||:||||||||||||||||||||||||
BPUM_0111___r     51 ENNQAKIGDIVKVMETRPLSATKRFRLVEVVEEAVII     87


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.