Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00228 and BPUM_0110

See DNA alignment / Visit BSNT_00228 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00228___rpmC.1.24716.seq
#    -bsequence pep-align/BPUM_0110___rpmC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00228___rpmC-BPUM_0110___rpmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00228___rpmC-BPUM_0110___rpmC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00228___rpmC
# 2: BPUM_0110___rpmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      64/74 (86.5%)
# Similarity:    66/74 (89.2%)
# Gaps:           8/74 (10.8%)
# Score: 308.0
# 
#
#=======================================

BSNT_00228___      1 --------MKANEIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTAR     42
                             ||||||||||||||||||||||||||||||||||||||||||
BPUM_0110___r      1 MKKLVVNQMKANEIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTAR     50

BSNT_00228___     43 IREVRKAIARMKTVIREREIAANK     66
                     ||||||:|||||||||:|||||||
BPUM_0110___r     51 IREVRKSIARMKTVIRQREIAANK     74


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