Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00228 and BPUM_0110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence dna-align/BSNT_00228___rpmC.1.24716.seq
# -bsequence dna-align/BPUM_0110___rpmC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00228___rpmC-BPUM_0110___rpmC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00228___rpmC-BPUM_0110___rpmC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00228___rpmC
# 2: BPUM_0110___rpmC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 189/225 (84.0%)
# Similarity: 189/225 (84.0%)
# Gaps: 24/225 (10.7%)
# Score: 897.0
#
#
#=======================================
BSNT_00228___ 1 ------------------------ATGAAAGCTAATGAAATTCGTGACCT 26
||||||||||||||||||||||||||
BPUM_0110___r 1 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAATGAAATTCGTGACCT 50
BSNT_00228___ 27 TACCACTGCTGAAATTGAACAAAAAGTAAAGTCTCTTAAAGAAGAACTTT 76
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0110___r 51 TACCACTGCTGAAATTGAACAAAAAGTAAAGTCTCTTAAAGAAGAACTTT 100
BSNT_00228___ 77 TCAATCTTCGCTTTCAATTAGCGACAGGACAACTTGAAAATACTGCTCGC 126
||||||||||.||.|||||||||||.||.||.||||||||.|||||||||
BPUM_0110___r 101 TCAATCTTCGTTTCCAATTAGCGACTGGGCAGCTTGAAAACACTGCTCGC 150
BSNT_00228___ 127 ATTCGTGAAGTGCGCAAAGCTATCGCGCGCATGAAAACTGTGATTCGTGA 176
||||||||||||||.|||.|.|||||.|||||||||||||||||||||.|
BPUM_0110___r 151 ATTCGTGAAGTGCGTAAATCAATCGCACGCATGAAAACTGTGATTCGTCA 200
BSNT_00228___ 177 AAGAGAAATTGCTGCTAATAAATAA 201
|||||||||.|||||||||||||||
BPUM_0110___r 201 AAGAGAAATCGCTGCTAATAAATAA 225
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