Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00222 and BPUM_0104

See DNA alignment / Visit BSNT_00222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:10
# Commandline: needle
#    -asequence pep-align/BSNT_00222___rplW.1.24716.seq
#    -bsequence pep-align/BPUM_0104___rplW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00222___rplW-BPUM_0104___rplW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00222___rplW-BPUM_0104___rplW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00222___rplW
# 2: BPUM_0104___rplW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      90/95 (94.7%)
# Similarity:    93/95 (97.9%)
# Gaps:           0/95 ( 0.0%)
# Score: 456.0
# 
#
#=======================================

BSNT_00222___      1 MKDPRDVLKRPVITERSADLMTEKKYTFEVDVRANKTEVKDAVESIFGVK     50
                     |||||||||||:||||||||||||||||||||||||||||||||.|||||
BPUM_0104___r      1 MKDPRDVLKRPIITERSADLMTEKKYTFEVDVRANKTEVKDAVEEIFGVK     50

BSNT_00222___     51 VDKVNIMNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA     95
                     |:|||:.||||||||||||||||||||||||||||||||||||||
BPUM_0104___r     51 VEKVNVQNYKGKSKRVGRYTGMTSRRRKAIVKLTADSKEIEIFEA     95


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.