Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00220 and BPUM_0102
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:10
# Commandline: needle
# -asequence pep-align/BSNT_00220___rplC.1.24716.seq
# -bsequence pep-align/BPUM_0102___rplC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00220___rplC-BPUM_0102___rplC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00220___rplC-BPUM_0102___rplC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00220___rplC
# 2: BPUM_0102___rplC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 194/209 (92.8%)
# Similarity: 203/209 (97.1%)
# Gaps: 0/209 ( 0.0%)
# Score: 1005.0
#
#
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BSNT_00220___ 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQ 50
|||||||||||||||||||||||||||:|||.||||||||.:.|||||||
BPUM_0102___r 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTTDTDGYEAIQ 50
BSNT_00220___ 51 LGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVE 100
:||||||||||||||||||||||||||||||||||.|:|||||||||||:
BPUM_0102___r 51 IGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGAELDAYEVGQEVKVD 100
BSNT_00220___ 101 IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVD 150
||:.|:||||||.||||||||||||||||||||:||||||||||||||||
BPUM_0102___r 101 IFANGDIVDVTGTSKGKGFQGAIKRHGQSRGPMTHGSRYHRRPGSMGPVD 150
BSNT_00220___ 151 PNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLI 200
|||||||||||||||||||||||||||||||||||||||||||||||||:
BPUM_0102___r 151 PNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLV 200
BSNT_00220___ 201 TVKSAVKSK 209
|||||||||
BPUM_0102___r 201 TVKSAVKSK 209
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