Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00217 and BPUM_0100

See DNA alignment / Visit BSNT_00217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:10
# Commandline: needle
#    -asequence pep-align/BSNT_00217___ybaC.1.24716.seq
#    -bsequence pep-align/BPUM_0100___ybaC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00217___ybaC-BPUM_0100___ybaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00217___ybaC-BPUM_0100___ybaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00217___ybaC
# 2: BPUM_0100___ybaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     128/326 (39.3%)
# Similarity:   196/326 (60.1%)
# Gaps:          15/326 ( 4.6%)
# Score: 665.0
# 
#
#=======================================

BSNT_00217___      1 MIPEKKSIAIMKELSIGNTKQMLMI--NGVDVKNPLLLFLHGGPGTPQIG     48
                          .:...:|:..||...|.:||  :......|:|||:|||||:.||.
BPUM_0100___y      1 -----MAKTYLKKWLIGGVDQWIMIQEDHTSEAKPVLLFVHGGPGSAQIS     45

BSNT_00217___     49 YVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTIDHFIKDTIQVTQ     98
                     |:..:.:||.:.||||||||||:||||...:.:.||||..||:|||::|:
BPUM_0100___y     46 YINSFHEELNRDFTVVHWDQRGAGLSYQNNLPNTSMTIQQFIEDTIELTE     95

BSNT_00217___     99 WLLAHFSKSKLYLAGHSWGSILALHVLQQCPDLFYAYYGISQVVNPHDEE    148
                     .:|::..:||||:||:||||::|:..:.:.|||::|||||||||:...|:
BPUM_0100___y     96 KILSYLGQSKLYIAGYSWGSLIAIQAVHKRPDLYHAYYGISQVVDVLKED    145

BSNT_00217___    149 STAFQNIREISKSKKASLLSFLTRFIGAPPWKQDIQHLIYRFCVELSRGG    198
                     ..::..:  :.|..:..|.::..|.:..||||:...|.::....||...|
BPUM_0100___y    146 IVSYDLL--LKKYHRNRLFAWCLRLLTPPPWKRLSAHALFSLYKELGSVG    193

BSNT_00217___    199 FTRRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTGELYRFNAF    248
                     .|.:.:..|.:|...:...||.:::...||.|.:||:..|..||...:..
BPUM_0100___y    194 LTHKWKPLLQMLHSFIFSKEYQLKDKWKFLKGQKFSQDMLWDELMNESIE    243

BSNT_00217___    249 TSVPSIKVPCVFISGKHDLIVPAEISKQYYQVLEAPEKRWFQFENSAHTP    298
                     ..|.:|.:||.||.|::|:|.||.:||.|.:.|:||.|.||.|:.|||:|
BPUM_0100___y    244 YRVSTILIPCYFIIGEYDMITPAAVSKPYVEQLKAPIKEWFTFKESAHSP    293

BSNT_00217___    299 HIEEPALFANTLSRHARHHL------    318
                     |:|||..|..|:.:.|.|||      
BPUM_0100___y    294 HLEEPEEFIRTIKKTAVHHLQGKLDL    319


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