Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00203 and BPUM_0088
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:08
# Commandline: needle
# -asequence pep-align/BSNT_00203___rplA.1.24716.seq
# -bsequence pep-align/BPUM_0088___rplA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00203___rplA-BPUM_0088___rplA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00203___rplA-BPUM_0088___rplA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00203___rplA
# 2: BPUM_0088___rplA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 212/232 (91.4%)
# Similarity: 224/232 (96.6%)
# Gaps: 0/232 ( 0.0%)
# Score: 1094.0
#
#
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BSNT_00203___ 1 MAKKGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGV 50
||||||||||||||::|:|||||:|||:|.||.|||||||||||||||||
BPUM_0088___r 1 MAKKGKKYVEAAKLIERTKAYDVAEAVSLTKKANTAKFDATVEVAFRLGV 50
BSNT_00203___ 51 DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDY 100
|||||||||||||||||||||||||||||||||||||||||||:|||:||
BPUM_0088___r 51 DPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDSDY 100
BSNT_00203___ 101 INKIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVE 150
|.|||||||:||||||||||||||||||||||||||||||||||||||||
BPUM_0088___r 101 ITKIQQGWFEFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVE 150
BSNT_00203___ 151 KAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAK 200
|||.||||||||||||||||||.||||||||||||||||.|:||||||||
BPUM_0088___r 151 KAINEIKAGKVEYRVDKAGNIHAPIGKVSFEDEKLVENFATIYDTILKAK 200
BSNT_00203___ 201 PAAAKGVYVKNVAVTSTMGPGVKVDSSTFNVK 232
||||||||||||:||||||||||||.|:|:.|
BPUM_0088___r 201 PAAAKGVYVKNVSVTSTMGPGVKVDPSSFSAK 232
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