Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00202 and BPUM_0087

See DNA alignment / Visit BSNT_00202 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence pep-align/BSNT_00202___rplK.1.24716.seq
#    -bsequence pep-align/BPUM_0087___rplK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00202___rplK-BPUM_0087___rplK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00202___rplK-BPUM_0087___rplK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00202___rplK
# 2: BPUM_0087___rplK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     137/159 (86.2%)
# Similarity:   140/159 (88.1%)
# Gaps:          18/159 (11.3%)
# Score: 685.0
# 
#
#=======================================

BSNT_00202___      1 ------------------MAKKVVKVVKLQIPAGKANPAPPVGPALGQAG     32
                                       :|||||||||||||||||||||||||||||||
BPUM_0087___r      1 MGGGFPYYHITDFKEVCLVAKKVVKVVKLQIPAGKANPAPPVGPALGQAG     50

BSNT_00202___     33 VNIMGFCKEFNARTADQAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKA     82
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
BPUM_0087___r     51 VNIMGFCKEFNARTADQAGLIIPVEISVFEDRSFTFITKTPPAAVLLKKA    100

BSNT_00202___     83 AGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAADVEAAMRMVEGTA    132
                     |||||||||||||||||||||||||||||||||||||.||:|||||||||
BPUM_0087___r    101 AGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVESAMRMVEGTA    150

BSNT_00202___    133 RSMGIVIED    141
                     |||||||||
BPUM_0087___r    151 RSMGIVIED    159


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