Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00197 and BPUM_0083
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence pep-align/BSNT_00197___sigH.1.24716.seq
# -bsequence pep-align/BPUM_0083___sigH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00197___sigH-BPUM_0083___sigH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00197___sigH-BPUM_0083___sigH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00197___sigH
# 2: BPUM_0083___sigH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 200/218 (91.7%)
# Similarity: 213/218 (97.7%)
# Gaps: 0/218 ( 0.0%)
# Score: 1017.0
#
#
#=======================================
BSNT_00197___ 1 MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKA 50
|||.|:|.|..:|||||||||||||:||||||||||||||||||||||||
BPUM_0083___s 1 MNLNNSKDKSIREQFCQLEDEQVIERVHVGDSDALDYLITKYRNFVRAKA 50
BSNT_00197___ 51 RSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIIT 100
||||||||||||||||||||||||||||:|||||||||||||||||||||
BPUM_0083___s 51 RSYFLIGADREDIVQEGMIGLYKSIRDFREDKLTSFKAFAELCITRQIIT 100
BSNT_00197___ 101 AIKTATRQKHIPLNSYVSLDKPIFDEESDRTLLDVISGAKTLNPEEMIIN 150
|||||||||||||||||||||||:||||||||||||||||.||||::||:
BPUM_0083___s 101 AIKTATRQKHIPLNSYVSLDKPIYDEESDRTLLDVISGAKALNPEDLIIS 150
BSNT_00197___ 151 QEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNAL 200
:|||||||||||||||:|||||||||||||||||||::||||||||||||
BPUM_0083___s 151 KEEFDDIEMKMGELLSELERKVLVLYLDGRSYQEISEDLNRHVKSIDNAL 200
BSNT_00197___ 201 QRVKRKLEKYLEIREISL 218
||||||||||||:|||||
BPUM_0083___s 201 QRVKRKLEKYLELREISL 218
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