Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00192 and BPUM_0078

See DNA alignment / Visit BSNT_00192 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:07
# Commandline: needle
#    -asequence pep-align/BSNT_00192___cysE.1.24716.seq
#    -bsequence pep-align/BPUM_0078___cysE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00192___cysE-BPUM_0078___cysE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00192___cysE-BPUM_0078___cysE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00192___cysE
# 2: BPUM_0078___cysE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity:     185/219 (84.5%)
# Similarity:   199/219 (90.9%)
# Gaps:           4/219 ( 1.8%)
# Score: 963.5
# 
#
#=======================================

BSNT_00192___      1 MFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKF     50
                     |||:|||||||||||||||||||.||:|||||||||||||||||.||||.
BPUM_0078___c      1 MFFKMLKEDIDTVFDQDPAARSYIEVVLTYSGLHAIWAHRIAHAFYKRKL     50

BSNT_00192___     51 YFLARFISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVT    100
                     |||||.||||||||||:||||.||||||||||||||||||||||||:|||
BPUM_0078___c     51 YFLARIISQVSRFFTGVEIHPAATIGRRFFIDHGMGVVIGETCEIGDNVT    100

BSNT_00192___    101 VFQGVTLGGTGKEKGKRHPTIKDDALIATGAKVLGSITVGEGSKIGAGSV    150
                     |||||||||||||||||||||.||||||||||||||||||:|:|||||||
BPUM_0078___c    101 VFQGVTLGGTGKEKGKRHPTILDDALIATGAKVLGSITVGKGAKIGAGSV    150

BSNT_00192___    151 VLHDVPDFSTVVGIPGRVVVQNGKKVRRDLNHQDLPDPVADRFKSLEQQI    200
                     ||.||||.|||||||||||||||||:.|||||||||||::||||.||:::
BPUM_0078___c    151 VLKDVPDHSTVVGIPGRVVVQNGKKINRDLNHQDLPDPISDRFKELEREM    200

BSNT_00192___    201 LELKAELE--DRKERINQK    217
                     .:||.||.  .|||..:  
BPUM_0078___c    201 EKLKGELASLSRKEEQS--    217


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.