Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00192 and BPUM_0078
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:07
# Commandline: needle
# -asequence dna-align/BSNT_00192___cysE.1.24716.seq
# -bsequence dna-align/BPUM_0078___cysE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00192___cysE-BPUM_0078___cysE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00192___cysE-BPUM_0078___cysE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00192___cysE
# 2: BPUM_0078___cysE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity: 489/663 (73.8%)
# Similarity: 489/663 (73.8%)
# Gaps: 18/663 ( 2.7%)
# Score: 1755.0
#
#
#=======================================
BSNT_00192___ 1 GTGTTTTTTAGAATGCTCAAAGAAGACATTGATACTGTGTTCGATCAAGA 50
||||||||.|.||||||.||||||||.||||||||||||||.||||||||
BPUM_0078___c 1 GTGTTTTTCAAAATGCTGAAAGAAGATATTGATACTGTGTTTGATCAAGA 50
BSNT_00192___ 51 TCCCGCAGCAAGAAGCTATTTTGAAGTGATTTTAACTTATTCCGGTTTAC 100
|||.||.||.|||||||||.|||||||..|..||||.|||||.||..|.|
BPUM_0078___c 51 TCCTGCTGCTAGAAGCTATATTGAAGTAGTGCTAACCTATTCAGGGCTTC 100
BSNT_00192___ 101 ATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTT 150
||||.||.|||||.|||||.||.||.|||||.||.|||||.||.||..|.
BPUM_0078___c 101 ATGCGATTTGGGCTCATCGTATCGCGCATGCATTTTATAAGCGGAAGCTG 150
BSNT_00192___ 151 TATTTCCTTGCACGCTTTATATCTCAAGTAAGCCGATTTTTTACCGGGAT 200
||.||.||||||||..|.||.|||||.||.|||||.|||||.||.|||.|
BPUM_0078___c 151 TACTTTCTTGCACGGATCATTTCTCAGGTCAGCCGGTTTTTCACAGGGGT 200
BSNT_00192___ 201 AGAAATCCACCCCGGCGCTACAATCGGGAGAAGATTTTTCATAGACCACG 250
.|||||.|||||.|..||.||.||.||.||..|.||.|||||.|||||||
BPUM_0078___c 201 GGAAATTCACCCTGCGGCCACCATTGGCAGGCGCTTCTTCATTGACCACG 250
BSNT_00192___ 251 GCATGGGGGTTGTCATTGGGGAGACATGTGAAATCGGCAATAACGTAACC 300
|.|||||.||.||.||||||||.||||||||||||||..|.|||||.||.
BPUM_0078___c 251 GTATGGGAGTGGTGATTGGGGAAACATGTGAAATCGGAGACAACGTCACT 300
BSNT_00192___ 301 GTTTTTCAGGGGGTTACCCTCGGGGGAACGGGGAAAGAAAAGGGAAAAAG 350
|||||.||.||.||.||..|.||||||||.|||||||||||||||||..|
BPUM_0078___c 301 GTTTTCCAAGGCGTGACATTAGGGGGAACAGGGAAAGAAAAGGGAAAGCG 350
BSNT_00192___ 351 GCACCCAACGATTAAAGATGACGCATTGATAGCCACAGGCGCTAAAGTGC 400
||||||.||.|||..|||.||.||..|.||.||.|||||.||.||.||||
BPUM_0078___c 351 GCACCCGACCATTTTAGACGATGCGCTCATTGCGACAGGTGCAAAGGTGC 400
BSNT_00192___ 401 TCGGTTCTATTACGGTCGGTGAAGGCTCAAAGATTGGCGCTGGTTCAGTA 450
|.|||||.|||||.|||||..||||..|.|||||.||.||.||.||.||.
BPUM_0078___c 401 TTGGTTCCATTACAGTCGGAAAAGGAGCCAAGATCGGAGCGGGATCGGTC 450
BSNT_00192___ 451 GTGCTGCATGATGTTCCTGATTTTTCAACAGTTGTCGGTATCCCTGGACG 500
||..|..|.||.||.|||||...||||||.|||||||||||.|||||.||
BPUM_0078___c 451 GTCTTAAAGGACGTACCTGACCATTCAACGGTTGTCGGTATACCTGGGCG 500
BSNT_00192___ 501 GGTAGTTGTACAAAATGGCAAGAAAGTAAGACGCGATTTAAACCATCAGG 550
.||.||.||.||||||||.||||||.|.|..||.|||.|.||.|||||.|
BPUM_0078___c 501 AGTCGTCGTTCAAAATGGTAAGAAAATTAATCGTGATCTCAATCATCAAG 550
BSNT_00192___ 551 ATTTGCCCGATCCAGTTGCTGACCGCTTTAAGTCTTTGGAAC-AGCAGAT 599
|||||||.||||||.||.|.||.||.||.||....||||||| || |.||
BPUM_0078___c 551 ATTTGCCAGATCCAATTTCCGATCGTTTCAAAGAATTGGAACGAG-AAAT 599
BSNT_00192___ 600 TTTAGAGCTGAAGGCAGAAC--------TTGAAGACAGAAAAGAAAGGAT 641
...|.||||.||.|..||.| |||| .||||||.||| ||.
BPUM_0078___c 600 GGAAAAGCTAAAAGGTGAGCTGGCTTCATTGA--GCAGAAAGGAA--GAA 645
BSNT_00192___ 642 CAATCAAAAATGA 654
||||| ||||
BPUM_0078___c 646 CAATC----ATGA 654
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