Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00135 and BPUM_0062

See DNA alignment / Visit BSNT_00135 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:05
# Commandline: needle
#    -asequence pep-align/BSNT_00135___folB.1.24716.seq
#    -bsequence pep-align/BPUM_0062___folB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00135___folB-BPUM_0062___folB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00135___folB-BPUM_0062___folB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00135___folB
# 2: BPUM_0062___folB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      89/120 (74.2%)
# Similarity:    98/120 (81.7%)
# Gaps:           8/120 ( 6.7%)
# Score: 470.0
# 
#
#=======================================

BSNT_00135___      1 MDKVYVEGMEFYGYHGVFKEENKLGQRFKVDLTAELDLSKAGQTDDLEQT     50
                             ||||||||||.|||||||||:|||||.||||||||||||.:|
BPUM_0062___f      1 --------MEFYGYHGVFAEENKLGQRFRVDLTASLDLSKAGQTDDLNET     42

BSNT_00135___     51 INYAELYHVCKDIVEGEPVKLVETLAERIAGTVLEKFQPVQQCTVKVIKP    100
                     |||||||.:||.|||||.|.|||||.||||..||:.|..||:||||||||
BPUM_0062___f     43 INYAELYQICKSIVEGESVNLVETLTERIASQVLKDFLTVQECTVKVIKP     92

BSNT_00135___    101 DPPIPGHYKSVAIEITRKKS    120
                     ||||||||:|||||:||.::
BPUM_0062___f     93 DPPIPGHYQSVAIEMTRSRA    112


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