Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00132 and BPUM_0060

See DNA alignment / Visit BSNT_00132 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:05
# Commandline: needle
#    -asequence pep-align/BSNT_00132___pabC.1.24716.seq
#    -bsequence pep-align/BPUM_0060___pabC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00132___pabC-BPUM_0060___pabC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00132___pabC-BPUM_0060___pabC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00132___pabC
# 2: BPUM_0060___pabC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     160/297 (53.9%)
# Similarity:   206/297 (69.4%)
# Gaps:          19/297 ( 6.4%)
# Score: 828.0
# 
#
#=======================================

BSNT_00132___      1 -MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCPFLLDWHIER     49
                      :||:||:|:|||||.||||||||||||||||||....|..||||||:||
BPUM_0060___p      1 MIIYLNGQYIEEKDATLSPFDHGFLYGIGVFETFTSLAGQVFLLDWHLER     50

BSNT_00132___     50 LERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDK     99
                     |.::|:||.||.|:.|..:|:::..||..|||..|:||:|.|:||| ...
BPUM_0060___p     51 LNQSLRDLCIESTIEKPFVLDIIHTLLNKNDIAGGHARIRFNVSAG-RGN     99

BSNT_00132___    100 GFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEGSFRLKSHH    149
                     ||.|..|::|.|...::..:|||:..:|:|.:|..||||||||.||||||
BPUM_0060___p    100 GFSADPYEEPVVFVMISPFRPESVLDEKQGVILQTRRNTPEGSRRLKSHH    149

BSNT_00132___    150 YLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLD    199
                     |:||:.||||:||||:|||||||::..|||||.||||||||..:||||||
BPUM_0060___p    150 YMNNLLAKREVGNDPKVEGIFLTKENDVAEGITSNVFWRKGDVMYTPSLD    199

BSNT_00132___    200 TGILDGVTRRFIIENAKNIGLELKTGRYELEALLTADEAWMTNSVLEIIP    249
                     ||||:|||||:.||..:.:...||.|||.:..||:||||||||||..|:|
BPUM_0060___p    200 TGILNGVTRRYCIETLQTMEASLKVGRYPVSHLLSADEAWMTNSVQGIVP    249

BSNT_00132___    250 FTKIEEVNYGSQSGEATSALQLLYKKE---IKNMIHEKGGRAWRSTQ    293
                     |..|.::::...|...::.|:..|.||   .|.              
BPUM_0060___p    250 FRSIGDISFSHNSRIFSTKLRTQYTKERLDYKE--------------    282


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