Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00130 and BPUM_0059
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence pep-align/BSNT_00130___pabA.1.24716.seq
# -bsequence pep-align/BPUM_0059___pabA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00130___pabA-BPUM_0059___pabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00130___pabA-BPUM_0059___pabA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: BPUM_0059___pabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 171/197 (86.8%)
# Similarity: 181/197 (91.9%)
# Gaps: 3/197 ( 1.5%)
# Score: 895.0
#
#
#=======================================
BSNT_00130___ 1 MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIEEIEELSPDFLMIS 50
||||||||||||||||||||||||||:|||||.:||:|||||.|||||||
BPUM_0059___p 1 MILMIDNYDSFTYNLVQYLGELGEELIVKRNDQVTIQEIEELKPDFLMIS 50
BSNT_00130___ 51 PGPCSPDEAGISLEAIKHFAGEIPIFGVCLGHQSIAQVFGGDVVRAERLM 100
||||||||||||:||||||||.||||||||||||||||||||||||||||
BPUM_0059___p 51 PGPCSPDEAGISMEAIKHFAGSIPIFGVCLGHQSIAQVFGGDVVRAERLM 100
BSNT_00130___ 101 HGKTSDIEHDGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEG 150
|||||:||||||.:|.||:||||||||||||||.||||.||..||.||||
BPUM_0059___p 101 HGKTSEIEHDGKGVFTGLQNPLVATRYHSLIVKNETLPECFDATASTKEG 150
BSNT_00130___ 151 EIMAIRHNDLPIEGVQFHPESIMTSFGKEMLRNFIETYRK---EVIA 194
|:|||||.:||||.|||||||||||||||||:|||||||| ||.|
BPUM_0059___p 151 ELMAIRHKELPIESVQFHPESIMTSFGKEMLKNFIETYRKKGHEVNA 197
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