Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00130 and BPUM_0059
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence dna-align/BSNT_00130___pabA.1.24716.seq
# -bsequence dna-align/BPUM_0059___pabA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00130___pabA-BPUM_0059___pabA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00130___pabA-BPUM_0059___pabA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: BPUM_0059___pabA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 613
# Identity: 452/613 (73.7%)
# Similarity: 452/613 (73.7%)
# Gaps: 47/613 ( 7.7%)
# Score: 1619.0
#
#
#=======================================
BSNT_00130___ 1 ATGATTTTAATGATTGATAACTACGATTCATTCACGTACAACTTGGTACA 50
|||||.||||||||||||||.||.||||||||.|||||||||.||||.||
BPUM_0059___p 1 ATGATATTAATGATTGATAATTATGATTCATTTACGTACAACCTGGTCCA 50
BSNT_00130___ 51 GTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGACAGCA 100
||||||.||.||||||||.|||||..||.|.||||||||.|||| |
BPUM_0059___p 51 GTATTTAGGTGAGCTTGGAGAAGAATTGATCGTGAAACGGAATG-----A 95
BSNT_00130___ 101 TCA------CAATCGAAGAAATTGAAGAACTGTCTCCGGACTTTCTGATG 144
||| ||.|| ||||||||||||||||....||.||.|||||.|||
BPUM_0059___p 96 TCAAGTAACCATTC-AAGAAATTGAAGAACTCAAGCCTGATTTTCTCATG 144
BSNT_00130___ 145 ATATCTCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGC 194
||.|||||.|||||.|||||.||||||||.||||||||.||..|.|||||
BPUM_0059___p 145 ATTTCTCCAGGACCATGCAGTCCTGATGAAGCGGGAATTAGTATGGAAGC 194
BSNT_00130___ 195 AATTAAACATTTCGCAGGGGAA--ATTCCTATTTTCGGTGTATGTCTCGG 242
|||.||.||.||.|| ||||| |||||.||||||||||||||.||.||
BPUM_0059___p 195 AATCAAGCACTTTGC--GGGAAGTATTCCGATTTTCGGTGTATGCCTAGG 242
BSNT_00130___ 243 ACATCAGTCCATCGCACAAGTGTTCGGTGGTGACGTTGTTAGGGCAGAAC 292
||||||.|||||.||.|||||.||.||.||.||.||.|||.|.||.||||
BPUM_0059___p 243 ACATCAATCCATTGCGCAAGTCTTTGGAGGGGATGTCGTTCGTGCTGAAC 292
BSNT_00130___ 293 GGCTT-ATGCACGGGAAAACCTCGGATATCGAGCATGACGGCAAAACCAT 341
|||| |||||.||.|||||.||.||.||.||.|||||||| ||||....
BPUM_0059___p 293 -GCTTAATGCATGGTAAAACGTCAGAGATTGAACATGACGG-AAAAGGTG 340
BSNT_00130___ 342 TTTTGA-AGGGTTGAAAAACCCCCTTGTTGCGACGCGATACCACTCGCTG 390
|.||.| .||..|..||||.||.|||||.||.|||.||||.||.||..|.
BPUM_0059___p 341 TCTTCACTGGACTCCAAAATCCGCTTGTCGCAACGAGATATCATTCATTA 390
BSNT_00130___ 391 ATCGT--AAAACCTGAGACGCTGCCA-AGCTGTTTT------ACAGTAAC 431
||.|| ||||| |||||||||||| || ||.||| |||| .|
BPUM_0059___p 391 ATTGTCAAAAAC--GAGACGCTGCCAGAG-TGCTTTGACGCAACAG--CC 435
BSNT_00130___ 432 AGCACAAACGAAAGAAGGAGAAATCATGGCTATTCGCCACAATGACCTCC 481
|||||| ||||||||.||..|||||||.||||||||.||.||.||.|
BPUM_0059___p 436 AGCACA----AAAGAAGGCGAGCTCATGGCCATTCGCCATAAAGAGCTGC 481
BSNT_00130___ 482 CGATAGAGGGCGTGCAATTTCACCCAGAGTCTATTATGACCTCCTTTGGG 531
|.||.||..|.||.||.|||||.||.||.||.||||||||.|||||.||.
BPUM_0059___p 482 CAATTGAAAGTGTACAGTTTCATCCTGAATCGATTATGACGTCCTTCGGA 531
BSNT_00130___ 532 AAAGAAATGCTCAGAAATTTTATTGAGACATATCGCA---------AGGA 572
|||||||||||.|.||||||.|||||.||.|||||.| |.||
BPUM_0059___p 532 AAAGAAATGCTTAAAAATTTCATTGAAACCTATCGTAAAAAGGGGCATGA 581
BSNT_00130___ 573 AGTTATTGCGTGA 585
|||.|..||.|||
BPUM_0059___p 582 AGTAAACGCATGA 594
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