Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00129 and BPUM_0058
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:04
# Commandline: needle
# -asequence pep-align/BSNT_00129___pabB.1.24716.seq
# -bsequence pep-align/BPUM_0058___pabB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00129___pabB-BPUM_0058___pabB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00129___pabB-BPUM_0058___pabB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00129___pabB
# 2: BPUM_0058___pabB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity: 345/501 (68.9%)
# Similarity: 397/501 (79.2%)
# Gaps: 32/501 ( 6.4%)
# Score: 1813.5
#
#
#=======================================
BSNT_00129___ 1 MEEKFTFFTHNIALQLKTSKKENRGMIQMAQRRPAGKKVPFQKDSFLQQF 50
|.||||.|.|:||.||:||:::
BPUM_0058___p 1 ----------------------------MTQRRPMGIKIPFTKDAFLKRY 22
BSNT_00129___ 51 EKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFK 100
|:|.....|||||||||||.|||||:.|||..|||||:|||.:.||:|||
BPUM_0058___p 23 EQLTAGVTHHVLLESARGGSYSIAGIHPIAKAKGKDGMTTIHYQDEVLFK 72
BSNT_00129___ 101 EGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSL 150
||||.|||..||:||:||||.|:||||||||||||||||||||:|||||:
BPUM_0058___p 73 EGDPFRAFTDWFQTLQTETNEEYPDFQGGAIGFLSYDYARYIEHFKMLSI 122
BSNT_00129___ 151 DDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADV--KLSELE 198
|||:|||:|||||:|:||:||:|..||||||..|: :..:|. :|.:|:
BPUM_0058___p 123 DDLKTPDLYFLVFNDVAVFDHEENMLWLITHTEGA-EPVSDTHQRLEDLK 171
BSNT_00129___ 199 QMWLTEL-PAVSLREMNPETDGSFAAPFTEDGFSQAVEKIKQYIASGDVF 247
|.|.:.. .:|......|..:...||||||:.|.:|||||||||||||||
BPUM_0058___p 172 QKWTSSANESVQSPVHEPSVEFVPAAPFTEETFGEAVEKIKQYIASGDVF 221
BSNT_00129___ 248 QVNLSIRQSQSLSAHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELL 297
||||||||.:.|..|||::|||||:|||||||:||.||||||:|||||||
BPUM_0058___p 222 QVNLSIRQDEQLHTHPYELYKTLRQVNPSPYMSYLHTPDFQIVCGSPELL 271
BSNT_00129___ 298 VSKKGKLLETRPIAGTRSRGKTNEEDEVLANELIHNEKERAEHVMLVDLE 347
:.|||..||||||||||||||...||..||.|||.|||||||||||||||
BPUM_0058___p 272 IKKKGTQLETRPIAGTRSRGKDEAEDHALAKELIENEKERAEHVMLVDLE 321
BSNT_00129___ 348 RNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHA 397
||||||||.|||||||||||||||||||||||||||||:|..||||::.|
BPUM_0058___p 322 RNDLGRVSTYGSVRVNEFMAIEKYSHVMHIVSNVQGELRDDCDAVDVMRA 371
BSNT_00129___ 398 VFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIR 447
||||||||||||||||||||||||||||||||||||||:|.|:.||||||
BPUM_0058___p 372 VFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGFNQDMHFNIVIR 421
BSNT_00129___ 448 TIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSKEETKI 497
|.|.|.|:||||||||:|||||||||||||.|||:|:::||:||||||.:
BPUM_0058___p 422 TAYCTEGKAFMQSGAGIVIDSVPKHEYKESIKKAYAVKKALQLSKEETIL 471
BSNT_00129___ 498 R 498
.
BPUM_0058___p 472 S 472
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