Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00116 and BPUM_0049

See DNA alignment / Visit BSNT_00116 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:03
# Commandline: needle
#    -asequence pep-align/BSNT_00116___yabS.1.24716.seq
#    -bsequence pep-align/BPUM_0049___yabS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00116___yabS-BPUM_0049___yabS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00116___yabS-BPUM_0049___yabS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00116___yabS
# 2: BPUM_0049___yabS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     193/245 (78.8%)
# Similarity:   216/245 (88.2%)
# Gaps:           1/245 ( 0.4%)
# Score: 991.0
# 
#
#=======================================

BSNT_00116___      1 MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDP     50
                     |..||:|||||||||||||||||||:|:.|||||||||||||||||:.|.
BPUM_0049___y      1 MRKGHVNQILLITDGCSNHGEDPLAIASLAKEQGITVNVIGIMEENRHDH     50

BSNT_00116___     51 EAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELK    100
                     |||||||||||||||:|||||..|||||||||||||||||||||||:||:
BPUM_0049___y     51 EAMKEVEGIALAGGGIHQVVYVQQLSQTVQMVTKKAMTQTLQGVVNKELQ    100

BSNT_00116___    101 QILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAPKLP    150
                     |||||:.|:|||.|:||||||||||||||||||||||||||||||.||||
BPUM_0049___y    101 QILGKDTEIEELPPDKRGEVMEVVDELGETVHLQVLVLVDTSASMKPKLP    150

BSNT_00116___    151 TVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLSTL    200
                     ||||||||||:|||||||.|:|.|||||||..:.|:||||||:..|||::
BPUM_0049___y    151 TVKEALIDLSISLNSRIGENQFGMCIFPGKNSDAEIVLNWTPRFDSLSSI    200

BSNT_00116___    201 FAKLSTGGITPTGPAIREATLQFEKIRSRRGMLADDERRFDEFGM    245
                     |.||:||||||||||:|||...|:.:|||:|:|...|.. ||||.
BPUM_0049___y    201 FQKLTTGGITPTGPALREALQHFKSVRSRKGLLEAKEEH-DEFGF    244


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