Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00087 and BPUM_0034
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:01
# Commandline: needle
# -asequence pep-align/BSNT_00087___gcaD.1.24716.seq
# -bsequence pep-align/BPUM_0034___gcaD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00087___gcaD-BPUM_0034___gcaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00087___gcaD-BPUM_0034___gcaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00087___gcaD
# 2: BPUM_0034___gcaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 385/466 (82.6%)
# Similarity: 415/466 (89.1%)
# Gaps: 10/466 ( 2.1%)
# Score: 1974.0
#
#
#=======================================
BSNT_00087___ 1 ----------MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDE 40
|||||||:||||:||||||||||||||||||||||||.||
BPUM_0034___g 1 MDNRDIGGQSMDKRFAVILAAGKGTRMKSKLYKVLHPVCGKPMVEHVADE 50
BSNT_00087___ 41 ALKLSLSKLVTIVGHGAEEVKKQLGDKSEYALQAEQLGTAHAVKQAQPFL 90
||||||:|||||||||||:||:||||:||||||.||||||||||||:.||
BPUM_0034___g 51 ALKLSLAKLVTIVGHGAEDVKEQLGDRSEYALQEEQLGTAHAVKQAKSFL 100
BSNT_00087___ 91 ADEKGVTIVICGDTPLLTAETMEQMLKEHAQREAKATILTAVAEDPTGYG 140
|.|||.|||||||||||||||||.||.||.:.:||.|||||.||||||||
BPUM_0034___g 101 AQEKGTTIVICGDTPLLTAETMEAMLSEHQKHQAKVTILTARAEDPTGYG 150
BSNT_00087___ 141 RIIRSENGAVQKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSN 190
||||.|.|||.||||||||::.||.|.|||||||||.||.|||.|:||||
BPUM_0034___g 151 RIIRDETGAVVKIVEHKDANDAERQVNEINTGTYCFSNEDLFRVIEQVSN 200
BSNT_00087___ 191 DNAQGEYYLPDVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFM 240
:|||||||||||||||||||:|||||||..|:||||||||:|||||||||
BPUM_0034___g 201 ENAQGEYYLPDVIEILKNEGQTVAAYQTPQFEETLGVNDRIALSQAEQFM 250
BSNT_00087___ 241 KERINKRHMQNGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGED 290
|.|||.:||:||||||||.|||||||||||.||:|||||||||.|:||.|
BPUM_0034___g 251 KRRINHQHMKNGVTLIDPENTYISPDAVIGEDTMIYPGTVIKGNVKIGAD 300
BSNT_00087___ 291 TIIGPHTEIMNSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGN 340
.||||:|||::|.||.|||||||||..|:||.||.|||||||||.|.||:
BPUM_0034___g 301 AIIGPNTEIVDSIIGDRTVIKQSVVCDSEVGVDVTIGPFAHIRPLSKIGD 350
BSNT_00087___ 341 EVKIGNFVEIKKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGK 390
|||||||||||||.||||||.|||||:|||||||||||||||||||||||
BPUM_0034___g 351 EVKIGNFVEIKKTVFGDRSKVSHLSYIGDAEVGTDVNLGCGSITVNYDGK 400
BSNT_00087___ 391 NKYLTKIEDGAFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIAR 440
||:|||||||||||||||||||||||:|||||||||||||||..||:|||
BPUM_0034___g 401 NKFLTKIEDGAFIGCNSNLVAPVTVGKGAYVAAGSTVTEDVPQDALSIAR 450
BSNT_00087___ 441 ARQVNKDDYVKNIHKK 456
||||||:|||||||||
BPUM_0034___g 451 ARQVNKEDYVKNIHKK 466
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