Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00082 and BPUM_0030

See DNA alignment / Visit BSNT_00082 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:01
# Commandline: needle
#    -asequence pep-align/BSNT_00082___ispE.1.24716.seq
#    -bsequence pep-align/BPUM_0030___ipk.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00082___ispE-BPUM_0030___ipk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00082___ispE-BPUM_0030___ipk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00082___ispE
# 2: BPUM_0030___ipk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     243/292 (83.2%)
# Similarity:   264/292 (90.4%)
# Gaps:           3/292 ( 1.0%)
# Score: 1260.0
# 
#
#=======================================

BSNT_00082___      1 MKAMRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELA     50
                        |||||||||||||||||..|||||||||||:|||||||||:|||||.
BPUM_0030___i      1 ---MRILEKAPAKINLSLDVHGKRPDGYHEVEMVMTTIDLADRLELTELD     47

BSNT_00082___     51 EDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAA    100
                     :||:|||||||||||||||||||||||:|.|:.::|||||:|||.|||||
BPUM_0030___i     48 KDEIRVSSHNRFVPDDQRNLAYQAAKLLKTRFGIQKGVSIVITKTIPVAA     97

BSNT_00082___    101 GLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTAL    150
                     |||||||||||.||||||||.|||:.:.||||||||||||||||:|||||
BPUM_0030___i     98 GLAGGSSDAAAALRGLNRLWKLNLTLDELAELGAEIGSDVSFCVHGGTAL    147

BSNT_00082___    151 ATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHPDVQGM    200
                     |||||||:|||:||||||||||||.||||||||||......:|||:|:.|
BPUM_0030___i    148 ATGRGEKLKHIATPPHCWVILAKPVIGVSTAEVYRQYDASKVEHPNVERM    197

BSNT_00082___    201 IEAIEEKSFQEMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSG    250
                     |||||.|.::|||..||||||||||.|:|||.|||.||||||||||||||
BPUM_0030___i    198 IEAIEAKDYKEMCGSLGNVLESVTLKMYPEVDMIKRQMKRFGADAVLMSG    247

BSNT_00082___    251 SGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD    292
                     ||||||||:|||||||||||||||||||||||||||||||||
BPUM_0030___i    248 SGPTVFGLIQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD    289


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