Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00081 and BPUM_0029

See DNA alignment / Visit BSNT_00081 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:01
# Commandline: needle
#    -asequence pep-align/BSNT_00081.1.24716.seq
#    -bsequence pep-align/BPUM_0029___sspF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00081-BPUM_0029___sspF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00081-BPUM_0029___sspF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00081
# 2: BPUM_0029___sspF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      48/61 (78.7%)
# Similarity:    52/61 (85.2%)
# Gaps:           7/61 (11.5%)
# Score: 258.0
# 
#
#=======================================

BSNT_00081         1 -------MSDEFKYELAKDLGFYDTVKNGGWGEIRARDAGNMVKRAIEIA     43
                            |||||||||||||||||||||||||||||||||||||||||:|
BPUM_0029___s      1 MGRRRGIMSDEFKYELAKDLGFYDTVKNGGWGEIRARDAGNMVKRAIELA     50

BSNT_00081        44 EQQMAQNQNNR     54
                     :|.|||::|.|
BPUM_0029___s     51 QQHMAQDENQR     61


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