Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00081 and BPUM_0029
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:01
# Commandline: needle
# -asequence dna-align/BSNT_00081.1.24716.seq
# -bsequence dna-align/BPUM_0029___sspF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00081-BPUM_0029___sspF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00081-BPUM_0029___sspF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00081
# 2: BPUM_0029___sspF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 135/186 (72.6%)
# Similarity: 135/186 (72.6%)
# Gaps: 21/186 (11.3%)
# Score: 555.0
#
#
#=======================================
BSNT_00081 1 ---------------------ATGTCAGATGAGTTTAAATATGAGCTGGC 29
||||||||||||||.|||||.||||||||
BPUM_0029___s 1 TTGGGTAGACGCCGAGGGATTATGTCAGATGAGTTCAAATACGAGCTGGC 50
BSNT_00081 30 TAAAGACCTTGGTTTTTATGACACAGTAAAAAATGGCGGCTGGGGCGAAA 79
.||.||.|||||.||||||||.||.||.||||||||.||||||||.||||
BPUM_0029___s 51 GAAGGATCTTGGATTTTATGATACCGTCAAAAATGGAGGCTGGGGAGAAA 100
BSNT_00081 80 TTCGGGCTCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCC 129
||||.||.||.||.||.|||||.|||||.||.|||||.||||||.|.||.
BPUM_0029___s 101 TTCGAGCGCGTGACGCAGGTAATATGGTCAAACGTGCCATTGAATTAGCT 150
BSNT_00081 130 GAACAGCAAATGGCTCAGAATCAGAATAACCGATAA 165
.|||||||.|||||||||.||.|||||.|.|||||.
BPUM_0029___s 151 CAACAGCACATGGCTCAGGATGAGAATCAACGATAG 186
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