Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00080 and BPUM_0028

See DNA alignment / Visit BSNT_00080 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00080___veg.1.24716.seq
#    -bsequence pep-align/BPUM_0028___veg.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00080___veg-BPUM_0028___veg.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00080___veg-BPUM_0028___veg.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00080___veg
# 2: BPUM_0028___veg
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 86
# Identity:      83/86 (96.5%)
# Similarity:    84/86 (97.7%)
# Gaps:           1/86 ( 1.2%)
# Score: 400.0
# 
#
#=======================================

BSNT_00080___      1 MAKTLSDIKRSLDGNLGKRLTLKANGGRRKTIERSGILAETYPSVFVIQL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0028___v      1 MAKTLSDIKRSLDGNLGKRLTLKANGGRRKTIERSGILAETYPSVFVIQL     50

BSNT_00080___     51 DQDENSFERVSYSYADILTETVELTFNDDAASSVAF     86
                     |||||||||||||||||||||||||| ||.|||||:
BPUM_0028___v     51 DQDENSFERVSYSYADILTETVELTF-DDTASSVAY     85


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.