Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00080 and BPUM_0028
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:00
# Commandline: needle
# -asequence dna-align/BSNT_00080___veg.1.24716.seq
# -bsequence dna-align/BPUM_0028___veg.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00080___veg-BPUM_0028___veg.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00080___veg-BPUM_0028___veg.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00080___veg
# 2: BPUM_0028___veg
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity: 221/261 (84.7%)
# Similarity: 221/261 (84.7%)
# Gaps: 3/261 ( 1.1%)
# Score: 946.0
#
#
#=======================================
BSNT_00080___ 1 ATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGG 50
|||||||||||.||||||||.||.|||||||||||||||||.||.|||||
BPUM_0028___v 1 ATGGCGAAGACTTTGTCCGACATCAAAAGATCGCTTGATGGTAACTTAGG 50
BSNT_00080___ 51 TAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGC 100
||||.|..||||||||||.||.|||||.||||||||.|||||.|||||||
BPUM_0028___v 51 TAAACGTTTGACGTTAAAGGCTAACGGGGGCCGCCGTAAAACAATTGAGC 100
BSNT_00080___ 101 GTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTA 150
|||||||||||||||||||.||||||||||||||.||||||||.|||.||
BPUM_0028___v 101 GTTCGGGCATTTTAGCTGAAACGTACCCTTCTGTATTTGTGATTCAATTA 150
BSNT_00080___ 151 GATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAT 200
||||||||.|||||.|||||||||||||||||.||.||||||||.|||||
BPUM_0028___v 151 GATCAAGATGAGAATTCGTTTGAAAGAGTTTCTTATAGTTATGCAGATAT 200
BSNT_00080___ 201 TTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAG 250
..||||||||||.||.||..|.||.|| .|||||..||||.|||||||
BPUM_0028___v 201 ACTGACTGAGACGGTCGAATTAACGTT---CGATGATACCGCTAGCTCAG 247
BSNT_00080___ 251 TGGCATTTTAA 261
|.||.|.||||
BPUM_0028___v 248 TCGCCTATTAA 258
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