Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00079 and BPUM_0027

See DNA alignment / Visit BSNT_00079 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00079___yabG.1.24716.seq
#    -bsequence pep-align/BPUM_0027___yabG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00079___yabG-BPUM_0027___yabG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00079___yabG-BPUM_0027___yabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00079___yabG
# 2: BPUM_0027___yabG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     230/294 (78.2%)
# Similarity:   266/294 (90.5%)
# Gaps:           4/294 ( 1.4%)
# Score: 1253.0
# 
#
#=======================================

BSNT_00079___      1 MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDF     50
                     |||||||||.|.|||||:|||||.|::|.:..:.|||||:|||||||:..
BPUM_0027___y      1 MQFQIGDMVTRASYQMDILFRIIRIDETDQHEATAILHGNEVRLIADAKL     50

BSNT_00079___     51 SDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQH    100
                     ||||.|:|:||:.|:|.||.::||||:||||||:|||||||||.:.||||
BPUM_0027___y     51 SDLVKVQKEEQLTREKNDERKINESLDLLRQDYQLLREKQEYYTSGQYQH    100

BSNT_00079___    101 QEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIE    150
                     ||.||||||||||||||.:||||||:||::|||||||:|||||||.:.|:
BPUM_0027___y    101 QEQYFHMPGKVLHLDGDASYLKKCLDVYERIGVPVYGVHCHEKKMPSMID    150

BSNT_00079___    151 ELLDKYRPDILVITGHDAYSKQKGGIDDLNAYRHSKHFVETVQTARKKIP    200
                     .|:|:||||||||||||||||||||:.|:.|||||:|||||||.||:|||
BPUM_0027___y    151 SLIDQYRPDILVITGHDAYSKQKGGVHDIGAYRHSRHFVETVQKARRKIP    200

BSNT_00079___    201 HLDQLVIFAGACQSHFESLIRAGANFASSPSRVNIHALDPVYIVAKISFT    250
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
BPUM_0027___y    201 HLDQLVIFAGACQSHFESLIQAGANFASSPSRVNIHALDPVYIVAKISFT    250

BSNT_00079___    251 PFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN----    290
                     ||::|||||:|||||||||||||||||:||||:|||||.:    
BPUM_0027___y    251 PFVDRINVWDVLRNTLTREKGLGGIETKGVLRVGMPYKRDHEST    294


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