Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00079 and BPUM_0027
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:00
# Commandline: needle
# -asequence dna-align/BSNT_00079___yabG.1.24716.seq
# -bsequence dna-align/BPUM_0027___yabG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00079___yabG-BPUM_0027___yabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00079___yabG-BPUM_0027___yabG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00079___yabG
# 2: BPUM_0027___yabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity: 672/908 (74.0%)
# Similarity: 672/908 (74.0%)
# Gaps: 58/908 ( 6.4%)
# Score: 2410.0
#
#
#=======================================
BSNT_00079___ 1 GTGCAATTTCAAATAGGGGATATGGTAGCCAGAAAATCCTATCAGATGGA 50
.||||||||||||||||.||||||||..|.||...|||||||||.|||||
BPUM_0027___y 1 ATGCAATTTCAAATAGGAGATATGGTGACAAGGGCATCCTATCAAATGGA 50
BSNT_00079___ 51 TGTTTTGTTTCGAATTATAGGAAT-----AGAGCAAACAAGCA--AAGGA 93
|.|||||||||||||.||..|||| |||.|.|.| |||| |||
BPUM_0027___y 51 TATTTTGTTTCGAATCATTCGAATTGATGAGACCGATC-AGCACGAAG-- 97
BSNT_00079___ 94 AATTCAATTGCCATTTTGCATGGAGATGAAGTCAGGCTGATTGCTGATTC 143
|.|..|||||.||||||||..|||||||.|||.|.|||||||||.|
BPUM_0027___y 98 ----CCACCGCCATATTGCATGGGAATGAAGTGAGGTTAATTGCTGATGC 143
BSNT_00079___ 144 GGATTTTTCTGATCTGGTGGCA--GTGAAAAAGGATGAGCAGATGA-TGC 190
..|.||.||.|||||.|| || ||..||||.||.||.|||.||| |
BPUM_0027___y 144 CAAGTTGTCAGATCTCGT--CAAGGTTCAAAAAGAGGAACAGCTGACT-- 189
BSNT_00079___ 191 GGAAAAAGAAAGATGA-GA--GCAGAATGAATGAGTCGCTCGAATTGCTC 237
|.|.|||||.|||| || |.|.|||.|||||.||||||||.||.||.
BPUM_0027___y 190 --AGAGAGAAAAATGACGAACGAAAAATCAATGAATCGCTCGATTTACTA 237
BSNT_00079___ 238 CGCCAAGATTATAAGCTGCTCAGAGAAAAGCAGGAGTACTATGCGACAAG 287
.|.||.||||||.|||||||..|.|||||.||.|||||.|||.||.||.|
BPUM_0027___y 238 AGACAGGATTATCAGCTGCTGCGGGAAAAACAAGAGTATTATACGTCAGG 287
BSNT_00079___ 288 CCAATATCAGCATCAGGAGCATTATTTCCATATGCCGGGCAAAGTGCTTC 337
.||||||||||||||||||||.|||||.||.|||||.||.||.||.||||
BPUM_0027___y 288 GCAATATCAGCATCAGGAGCAGTATTTTCACATGCCTGGAAAGGTCCTTC 337
BSNT_00079___ 338 ATCTGGATGGTGACGAAGCATATCTGAAA-AAATGCCTGAATGTCTATAA 386
||.|.|||||.||.|...|||| ||.||| ||||||.|..||||.|||.|
BPUM_0027___y 338 ATTTAGATGGAGATGCTTCATA-CTTAAAGAAATGCTTAGATGTATATGA 386
BSNT_00079___ 387 AAAAATTGGAGTGCCGGTCTATGGCATCCATTGCCATGAAAAGAAAATGT 436
|..||||||.||.||.||.|||||..|.|||||||||||.|||||||||.
BPUM_0027___y 387 ACGAATTGGTGTACCTGTGTATGGGGTGCATTGCCATGAGAAGAAAATGC 436
BSNT_00079___ 437 C-----TGCTT--CT-ATTGAAGAATTGCTCGACAAATATCGACCTGATA 478
| ||.|| || ||| |||||.|| |.||||||||.||||
BPUM_0027___y 437 CAAGCATGATTGACTCATT----AATTGATC----AGTATCGACCAGATA 478
BSNT_00079___ 479 TCCTGGTGATCACAGGGCATGATGCGTATTCGAAGCAAAAGGGCGGCATT 528
|..||||.||||||||.||||||||||||||.||||||||||||||..|.
BPUM_0027___y 479 TATTGGTTATCACAGGACATGATGCGTATTCAAAGCAAAAGGGCGGTGTA 528
BSNT_00079___ 529 GATGATTTGAATGCGTACAGACATTCTAAGCACTTTGTTGAAACTGTTCA 578
.|||||.|...|||.||..|.||||||..|||.||.||||||||.|||||
BPUM_0027___y 529 CATGATATCGGTGCATATCGCCATTCTCGGCATTTCGTTGAAACGGTTCA 578
BSNT_00079___ 579 AACAGCCCGAAAAAAGATCCCTCACTTAGATCAGCTTGTTATTTTTGCGG 628
||.||||.||..|||.||||||||.||||||||||||||.||.|||||.|
BPUM_0027___y 579 AAAAGCCAGACGAAAAATCCCTCATTTAGATCAGCTTGTGATCTTTGCCG 628
BSNT_00079___ 629 GGGCCTGCCAATCCCATTTTGAATCACTCATCAGAGCGGGTGCGAATTTT 678
|.|||||.|||||.|||||.||||||.|.|||..|||.|||||.||||||
BPUM_0027___y 629 GTGCCTGTCAATCTCATTTCGAATCATTGATCCAAGCAGGTGCCAATTTT 678
BSNT_00079___ 679 GCAAGTTCACCGTCAAGAGTCAATATTCATGCGCTTGATCCGGTATATAT 728
||.||.||.||.||..|.||.|||||.||||||||.||.||.||.|||||
BPUM_0027___y 679 GCGAGCTCGCCTTCCCGTGTGAATATCCATGCGCTCGACCCCGTTTATAT 728
BSNT_00079___ 729 CGTCGCGAAGATCAGCTTTACGCCGTTTATGGAACGGATTAATGTATGGG 778
|||.||||||||||||||.||.||.|||.|.||.||.||.||.||.||||
BPUM_0027___y 729 CGTTGCGAAGATCAGCTTCACTCCATTTGTAGATCGAATCAACGTGTGGG 778
BSNT_00079___ 779 AAGTGCTCCGTAATACGCTGACAAGAGAGAAAGGGCTTGGAGGTATTGAA 828
|.||||||||||||||..|.||||||||.||||||||.|||||.||.||.
BPUM_0027___y 779 ATGTGCTCCGTAATACATTAACAAGAGAAAAAGGGCTCGGAGGCATCGAG 828
BSNT_00079___ 829 AC-AAGAGGAGTTCTGAGAATTGGTATGCCTTATA----AGTCC---AAT 870
|| ||| ||.|||||.||..|.||||||||.|||| ||.|| |||
BPUM_0027___y 829 ACGAAG-GGTGTTCTAAGGGTAGGTATGCCATATAAAAGAGACCATGAAT 877
BSNT_00079___ 871 -----TAA 873
|||
BPUM_0027___y 878 CGACATAA 885
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