Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00076 and BPUM_0025
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:00
# Commandline: needle
# -asequence pep-align/BSNT_00076___rnmV.1.24716.seq
# -bsequence pep-align/BPUM_0025___rnmV.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00076___rnmV-BPUM_0025___rnmV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00076___rnmV-BPUM_0025___rnmV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00076___rnmV
# 2: BPUM_0025___rnmV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 144/186 (77.4%)
# Similarity: 161/186 (86.6%)
# Gaps: 0/186 ( 0.0%)
# Score: 729.0
#
#
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BSNT_00076___ 1 MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRG 50
|||||||||||||||||:|:||||||||||||||.|.||.|:||||:|||
BPUM_0025___r 1 MKIKEIIVVEGRDDTARVKMAVDADTIETNGSAIGDTVIQQVRLAQETRG 50
BSNT_00076___ 51 VIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASV 100
||||||||||||||||||:|||||||||||||||||.|..:||||||||:
BPUM_0025___r 51 VIILTDPDFPGEKIRKTIAEAVPGCKHAFLPKHLAKAKRDKGIGVEHASL 100
BSNT_00076___ 101 ESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGHAAKCRRERLGDLLKI 150
:|||.||.:||||||...|||:.:||..||||||.::|.||||||.||.|
BPUM_0025___r 101 DSIRECLAHVHEEMEVTESDITLDDLFDAGLIGGESSKRRRERLGVLLNI 150
BSNT_00076___ 151 GYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE 186
||||.|||.|||.||||.|.||::||.|||:||.:|
BPUM_0025___r 151 GYTNAKQLHKRLHMFQITKHDFIAALKTVMQEEADE 186
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