Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00073 and BPUM_0023

See DNA alignment / Visit BSNT_00073 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00073___yabD.1.24716.seq
#    -bsequence pep-align/BPUM_0023___yabD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00073___yabD-BPUM_0023___yabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00073___yabD-BPUM_0023___yabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00073___yabD
# 2: BPUM_0023___yabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     217/255 (85.1%)
# Similarity:   243/255 (95.3%)
# Gaps:           0/255 ( 0.0%)
# Score: 1178.0
# 
#
#=======================================

BSNT_00073___      1 MLFDTHAHLNAEQYDTDLDEVIERAKAEKVERIVVVGFDRPTITRAMEMI     50
                     ||||||||||||||:.||::||||||:||||:||||||||||||||||:|
BPUM_0023___y      1 MLFDTHAHLNAEQYNEDLEQVIERAKSEKVEKIVVVGFDRPTITRAMELI     50

BSNT_00073___     51 EEYDFIYAAIGWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHWD    100
                     |.|||||||||||||||||||:|||.||||||.||||||||||||||:||
BPUM_0023___y     51 EAYDFIYAAIGWHPVDAIDMTDEDLLWIKELSQHEKVVAIGEMGLDYYWD    100

BSNT_00073___    101 KSPKDIQKEVFRKQIALAKEVNLPIIIHNRDATEDVVTILKEEGAEAVGG    150
                     |||||:||||||:||||||||||||:|||||||||||||||||||..|||
BPUM_0023___y    101 KSPKDVQKEVFRRQIALAKEVNLPIVIHNRDATEDVVTILKEEGAAEVGG    150

BSNT_00073___    151 IMHCFTGSAEVARECMKMNFYLSFGGPVTFKNAKKPKEVVKEIPNDRLLI    200
                     ||||||||.|:|:.||.||||:|||||||||||||||||||:||:|||||
BPUM_0023___y    151 IMHCFTGSLEIAKVCMDMNFYISFGGPVTFKNAKKPKEVVKDIPSDRLLI    200

BSNT_00073___    201 ETDCPFLTPHPFRGKRNEPSYVKYVAEQIAELKEMTFEEIASITTENAKR    250
                     |||||:|||.||||||||||||||:|||||||:|::|||:|.:||:|||:
BPUM_0023___y    201 ETDCPYLTPTPFRGKRNEPSYVKYIAEQIAELREISFEELAELTTKNAKK    250

BSNT_00073___    251 LFRIN    255
                     :|.||
BPUM_0023___y    251 VFGIN    255


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